Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29170.1 | Thale cress | cytosol | 34.7 | 86.92 |
| CDY09823 | Canola | peroxisome | 82.09 | 81.18 |
| CDY09824 | Canola | mitochondrion | 81.72 | 80.81 |
| CDX97893 | Canola | mitochondrion | 81.72 | 80.81 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 81.34 | 80.44 |
| Bra039976.1-P | Field mustard | cytosol | 81.34 | 80.44 |
| AT2G29350.1 | Thale cress | plastid | 80.6 | 80.3 |
| AT2G29360.1 | Thale cress | cytosol | 80.22 | 79.34 |
| AT2G29290.2 | Thale cress | plastid | 76.12 | 77.86 |
| AT2G29370.1 | Thale cress | peroxisome | 77.61 | 77.61 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 21.27 | 69.51 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 28.73 | 69.37 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 28.73 | 68.14 |
| Solyc03g096650.1.1 | Tomato | cytosol | 22.39 | 67.42 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 64.18 | 66.15 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 61.94 | 65.87 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 61.57 | 65.48 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 64.18 | 63.7 |
| KRH24731 | Soybean | nucleus | 63.43 | 63.67 |
| AT1G07440.1 | Thale cress | mitochondrion | 63.06 | 63.53 |
| AT5G06060.1 | Thale cress | peroxisome | 62.31 | 63.26 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 63.06 | 62.59 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 60.82 | 62.21 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 59.7 | 61.54 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 60.07 | 61.45 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 58.21 | 61.42 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 61.57 | 61.34 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 54.85 | 61.25 |
| KRH24733 | Soybean | nucleus | 60.07 | 60.75 |
| AT2G29320.1 | Thale cress | mitochondrion | 59.7 | 59.48 |
| KRH29740 | Soybean | cytosol | 20.15 | 55.1 |
| AT2G29300.2 | Thale cress | extracellular | 58.21 | 54.55 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.63 | 54.06 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.45 | 52.78 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 59.7 | 52.12 |
| AT2G29260.1 | Thale cress | plastid | 59.7 | 49.69 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 23.51 | 49.61 |
| AT4G05530.1 | Thale cress | peroxisome | 31.34 | 33.07 |
| AT3G05260.1 | Thale cress | cytosol | 30.97 | 28.72 |
| AT1G54870.2 | Thale cress | plastid | 31.34 | 24.93 |
| AT2G07640.1 | Thale cress | mitochondrion | 13.43 | 23.08 |
| AT1G36580.1 | Thale cress | nucleus | 16.79 | 23.08 |
| AT3G12800.1 | Thale cress | peroxisome | 25.37 | 22.82 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817464 | ProteinID:AAC95219.1 | ProteinID:AEC08217.1 | ArrayExpress:AT2G29150 |
| EnsemblPlantsGene:AT2G29150 | RefSeq:AT2G29150 | TAIR:AT2G29150 | RefSeq:AT2G29150-TAIR-G | EnsemblPlants:AT2G29150.1 | TAIR:AT2G29150.1 |
| Unigene:At.52964 | EMBL:DQ056552 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_180479.1 | PFAM:PF13561 | PRINTS:PR00080 |
| PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | UniProt:Q9ZW03 | InterPro:SDR_fam |
| SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00000A1A94 | : | : |
Description
Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
Coordinates
chr2:-:12535715..12536964
Molecular Weight (calculated)
28707.2 Da
IEP (calculated)
6.134
GRAVY (calculated)
-0.043
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.