Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 4
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G12800.1 | Thale cress | peroxisome | 91.67 | 47.99 |
| AT5G06060.1 | Thale cress | peroxisome | 25.0 | 14.77 |
| AT1G07440.1 | Thale cress | mitochondrion | 25.0 | 14.66 |
| AT2G29290.2 | Thale cress | plastid | 24.36 | 14.5 |
| AT2G29360.1 | Thale cress | cytosol | 25.0 | 14.39 |
| AT2G29350.1 | Thale cress | plastid | 24.36 | 14.13 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 23.08 | 13.85 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 23.08 | 13.74 |
| AT3G05260.1 | Thale cress | cytosol | 25.0 | 13.49 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 22.44 | 13.46 |
| AT2G29150.1 | Thale cress | peroxisome | 23.08 | 13.43 |
| AT4G05530.1 | Thale cress | peroxisome | 21.79 | 13.39 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 22.44 | 13.36 |
| AT2G29320.1 | Thale cress | mitochondrion | 21.79 | 12.64 |
| AT1G54870.2 | Thale cress | plastid | 26.92 | 12.46 |
| AT2G29370.1 | Thale cress | peroxisome | 21.15 | 12.31 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 23.72 | 12.05 |
| AT2G29300.2 | Thale cress | extracellular | 21.79 | 11.89 |
| AT2G29260.1 | Thale cress | plastid | 24.36 | 11.8 |
| AT1G36580.1 | Thale cress | nucleus | 7.05 | 5.64 |
| AT2G29170.1 | Thale cress | cytosol | 0.64 | 0.93 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:815336 | ProteinID:AAD37022.1 | ProteinID:AEC06057.1 | ArrayExpress:AT2G07640 |
| EnsemblPlantsGene:AT2G07640 | RefSeq:AT2G07640 | TAIR:AT2G07640 | RefSeq:AT2G07640-TAIR-G | EnsemblPlants:AT2G07640.1 | TAIR:AT2G07640.1 |
| Unigene:At.52679 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_178765.1 | PFAM:PF13561 | PRINTS:PR00081 | PANTHER:PTHR43296 |
| PANTHER:PTHR43296:SF1 | UniProt:Q9XE46 | InterPro:SDR_fam | SUPFAM:SSF51735 | UniParc:UPI000009F6AC | SEG:seg |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XE46]
Coordinates
chr2:+:3220739..3221422
Molecular Weight (calculated)
16847.4 Da
IEP (calculated)
9.074
GRAVY (calculated)
-0.206
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MCHAALKYLK KVAPGRDSSS GGGSIINISA TLHYTASRYQ IHVSAAKVAV DATTRNLALE WGTDYDIRVN GIATGPIGGT PGMSKLVPEE IENKTREYMP
101: LYKLGEKWDI AMAALYLSCD SGKYMSGLTM VVDGGLCLSK PRHLAKEWRR GLGPGE
101: LYKLGEKWDI AMAALYLSCD SGKYMSGLTM VVDGGLCLSK PRHLAKEWRR GLGPGE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.