Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- peroxisome 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29290.2 | Thale cress | plastid | 80.3 | 82.44 |
| AT2G29150.1 | Thale cress | peroxisome | 80.3 | 80.6 |
| AT2G29360.1 | Thale cress | cytosol | 81.04 | 80.44 |
| AT2G29170.1 | Thale cress | cytosol | 31.23 | 78.5 |
| AT2G29370.1 | Thale cress | peroxisome | 77.32 | 77.61 |
| CDY51372 | Canola | plastid | 77.32 | 74.55 |
| Bra039977.1-P | Field mustard | plastid | 53.16 | 74.09 |
| Solyc03g096650.1.1 | Tomato | cytosol | 22.68 | 68.54 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 28.25 | 68.47 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 28.25 | 67.26 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.45 | 67.07 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 64.31 | 66.54 |
| AT1G07440.1 | Thale cress | mitochondrion | 65.43 | 66.17 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 61.71 | 65.87 |
| KRH24731 | Soybean | nucleus | 64.68 | 65.17 |
| AT5G06060.1 | Thale cress | peroxisome | 63.94 | 65.15 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 60.97 | 65.08 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 62.45 | 64.12 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 62.45 | 64.12 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 64.31 | 64.07 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 61.71 | 63.85 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 63.57 | 63.57 |
| KRH24733 | Soybean | nucleus | 62.08 | 63.02 |
| AT2G29320.1 | Thale cress | mitochondrion | 62.08 | 62.08 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 62.08 | 61.85 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 58.36 | 61.81 |
| CDX97890 | Canola | cytosol | 77.32 | 61.36 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 54.65 | 61.25 |
| AT2G29300.2 | Thale cress | extracellular | 59.85 | 56.29 |
| KRH29740 | Soybean | cytosol | 20.45 | 56.12 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 36.43 | 54.44 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 61.34 | 53.75 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.07 | 53.66 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 23.05 | 48.82 |
| AT2G29260.1 | Thale cress | plastid | 57.99 | 48.45 |
| AT4G05530.1 | Thale cress | peroxisome | 29.74 | 31.5 |
| AT3G05260.1 | Thale cress | cytosol | 30.48 | 28.37 |
| AT1G54870.2 | Thale cress | plastid | 30.86 | 24.63 |
| AT2G07640.1 | Thale cress | mitochondrion | 14.13 | 24.36 |
| AT3G12800.1 | Thale cress | peroxisome | 26.39 | 23.83 |
| AT1G36580.1 | Thale cress | nucleus | 15.61 | 21.54 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817484 | UniProt:A0A178VTS8 | ProteinID:AAC95203.1 | ProteinID:AEC08239.1 |
| ProteinID:AEC08240.1 | ProteinID:AEC08241.1 | ArrayExpress:AT2G29350 | EnsemblPlantsGene:AT2G29350 | RefSeq:AT2G29350 | TAIR:AT2G29350 |
| RefSeq:AT2G29350-TAIR-G | EnsemblPlants:AT2G29350.1 | TAIR:AT2G29350.1 | EMBL:AY065111 | EMBL:AY081642 | EMBL:AY085321 |
| Unigene:At.28588 | GO:GO:0002213 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004022 | GO:GO:0005575 |
| GO:GO:0006950 | GO:GO:0007568 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001031442.1 |
| RefSeq:NP_180496.1 | RefSeq:NP_973558.1 | ProteinID:OAP09204.1 | PFAM:PF13561 | PO:PO:0000013 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0025022 |
| PO:PO:0025034 | PO:PO:0025281 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF7 | UniProt:Q9ZW18 | Symbol:SAG13 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI00000485AD | : | : | : | : | : |
Description
SAG13SAG13 [Source:UniProtKB/TrEMBL;Acc:A0A178VTS8]
Coordinates
chr2:+:12600914..12602556
Molecular Weight (calculated)
28821.4 Da
IEP (calculated)
5.706
GRAVY (calculated)
-0.013
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKEGGLGEN SRWSLGGMTA LVTGGSKGIG EAVVEELAML GAKVHTCARD ETQLQERLRE WQAKGFQVTT SVCDVSSRDQ RVKLMETVSS LYQGKLNILV
101: NNVGTSIFKP TTEYTAEDFS FVMATNLESA FHLSQLAHPL LKASGSGSIV LISSAAGVVH VNVGSIYGAT KGAMNQLARN LACEWASDNI RTNSVCPWYI
201: TTPLSNDFFD EEFKKEAVRT TPMGRVGEAN EVSPLVAFLC LPSASYITGQ TICVDGGATV NGFSFKTMP
101: NNVGTSIFKP TTEYTAEDFS FVMATNLESA FHLSQLAHPL LKASGSGSIV LISSAAGVVH VNVGSIYGAT KGAMNQLARN LACEWASDNI RTNSVCPWYI
201: TTPLSNDFFD EEFKKEAVRT TPMGRVGEAN EVSPLVAFLC LPSASYITGQ TICVDGGATV NGFSFKTMP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.