Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29320.1 | Thale cress | mitochondrion | 84.73 | 82.53 |
| Bra000476.1-P | Field mustard | cytosol, peroxisome, plastid | 80.92 | 80.92 |
| Bra039514.1-P | Field mustard | cytosol, peroxisome, plastid | 80.92 | 80.92 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 77.1 | 77.69 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 77.1 | 77.1 |
| AT2G29300.2 | Thale cress | extracellular | 82.82 | 75.87 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 72.52 | 73.08 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 80.92 | 69.06 |
| CDX95752 | Canola | cytosol | 62.6 | 68.91 |
| AT1G07440.1 | Thale cress | mitochondrion | 67.94 | 66.92 |
| AT2G29290.2 | Thale cress | plastid | 64.12 | 64.12 |
| AT2G29350.1 | Thale cress | plastid | 64.12 | 62.45 |
| AT2G29360.1 | Thale cress | cytosol | 64.12 | 61.99 |
| AT2G29370.1 | Thale cress | peroxisome | 63.36 | 61.94 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 59.16 | 61.51 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 25.95 | 61.26 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.61 | 60.67 |
| AT5G06060.1 | Thale cress | peroxisome | 60.69 | 60.23 |
| AT2G29150.1 | Thale cress | peroxisome | 61.45 | 60.07 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 61.45 | 59.63 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 25.57 | 59.29 |
| KRH24733 | Soybean | nucleus | 59.54 | 58.87 |
| KRH24731 | Soybean | nucleus | 59.92 | 58.8 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 56.49 | 58.73 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 18.32 | 58.54 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 59.92 | 58.15 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 55.73 | 57.48 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 57.63 | 56.13 |
| AT2G29170.1 | Thale cress | cytosol | 22.52 | 55.14 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 49.24 | 53.75 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 47.33 | 50.41 |
| KRH29740 | Soybean | cytosol | 18.7 | 50.0 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 33.97 | 49.44 |
| AT2G29260.1 | Thale cress | plastid | 55.73 | 45.34 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 21.76 | 44.88 |
| AT4G05530.1 | Thale cress | peroxisome | 27.48 | 28.35 |
| AT3G05260.1 | Thale cress | cytosol | 28.63 | 25.95 |
| AT3G12800.1 | Thale cress | peroxisome | 27.1 | 23.83 |
| AT2G07640.1 | Thale cress | mitochondrion | 13.74 | 23.08 |
| AT1G54870.2 | Thale cress | plastid | 29.01 | 22.55 |
| AT1G36580.1 | Thale cress | nucleus | 15.27 | 20.51 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817480 | ProteinID:AAC95207.1 | ProteinID:AEC08232.1 | EMBL:AK175221 |
| ArrayExpress:AT2G29310 | EnsemblPlantsGene:AT2G29310 | RefSeq:AT2G29310 | TAIR:AT2G29310 | RefSeq:AT2G29310-TAIR-G | EnsemblPlants:AT2G29310.1 |
| TAIR:AT2G29310.1 | EMBL:BT010425 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_180492.1 | PFAM:PF13561 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00080 |
| PRINTS:PR00081 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | UniProt:Q9ZW14 | InterPro:SDR_fam | SUPFAM:SSF51735 |
| UniParc:UPI00000A26A4 | : | : | : | : | : |
Description
Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
Coordinates
chr2:+:12589866..12591479
Molecular Weight (calculated)
28090.6 Da
IEP (calculated)
6.113
GRAVY (calculated)
0.177
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.