Factsheet for Zm00001d006796_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77380	Sorghum	mitochondrion	71.23	77.98
TraesCS1A01G083800.1	Wheat	plastid	69.27	71.47
TraesCS1D01G084900.1	Wheat	mitochondrion, plastid	67.88	70.03
TraesCS1B01G101100.1	Wheat	plastid	67.6	69.54
Os05t0140800-01	Rice	plastid	70.67	69.32
PGSC0003DMT400073652	Potato	cytosol, peroxisome, plastid	55.59	67.92
GSMUA_Achr4P24690_001	Banana	cytosol	55.87	67.11
KRG92837	Soybean	endoplasmic reticulum, nucleus	54.19	66.21
AT3G05260.1	Thale cress	cytosol	53.35	66.09
Bra021324.1-P	Field mustard	cytosol	53.07	65.74
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	52.51	65.51
CDY43488	Canola	cytosol	52.79	65.4
KRH33956	Soybean	endoplasmic reticulum	53.07	64.85
CDY27781	Canola	cytosol, peroxisome, plastid	51.4	63.67
GSMUA_Achr4P29030_001	Banana	cytosol	51.12	62.67
HORVU1Hr1G018140.5	Barley	extracellular, mitochondrion	69.27	62.16
Solyc01g098850.2.1	Tomato	extracellular	57.26	60.29
KRG96884	Soybean	cytosol	49.44	60.0
KRH68615	Soybean	cytosol, nucleus, plastid	36.87	59.73
KRH68572	Soybean	cytosol	49.72	59.33
KRH68573	Soybean	cytosol	45.25	58.91
AT1G54870.2	Thale cress	plastid	55.03	58.46
VIT_14s0128g00340.t01	Wine grape	plastid	55.59	58.36
CDY05152	Canola	cytosol	33.52	50.21
Zm00001d007687_P001	Maize	extracellular	22.07	30.04
Zm00001d048723_P001	Maize	mitochondrion	21.51	29.17
Zm00001d011930_P001	Maize	mitochondrion, plastid	22.07	28.21
Zm00001d019439_P001	Maize	extracellular	19.83	28.06
Zm00001d028575_P001	Maize	extracellular	20.67	27.11
Zm00001d002332_P026	Maize	peroxisome	21.23	25.59
Zm00001d026290_P001	Maize	peroxisome	21.23	25.5
Zm00001d038897_P001	Maize	peroxisome	18.99	24.37
Zm00001d048726_P001	Maize	cytosol	14.53	23.21

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1D6F0W7	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM25124.1	PFAM:PF13561
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43348	PANTHER:PTHR43348:SF4	InterPro:SDR_fam
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0001890B38	EnsemblPlantsGene:Zm00001d006796	EnsemblPlants:Zm00001d006796_P001	EnsemblPlants:Zm00001d006796_T001
SEG:seg	:	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr2:+:216891193..216892807

Molecular Weight (calculated)

38625.1 Da

IEP (calculated)

9.154

GRAVY (calculated)

-0.239

Length

358 amino acids

Sequence
(BLAST)

001: MRALLHLRLI NPCSPRAPRL PATPARALVA SFSGAWQAPS GRARARAAPP AVRAMASQQV FRAQQQQQQQ FPAQQQESQP GKEHAMDPRP EAIVQDYKAA
101: NKLKDKVALV TGGDSGIGRA VCLCFAKEGA TVAFTFVRGQ EEKDAEETLR ALRDIGSETG AREPMALPAD LGYEANCREV VERVASAYGG RIDVVVNNAA
201: EQYERESIGD VTEADLERVF RTNIFSYFLV SKHAVPRMEP GACIINTSSV NAYKGNKTLL DYTATKGAIV AFTRALSLQL ADRGIRVNGV APGPVWTPLI
301: PASFGKEKVE QFGSQVPMKR AAQPAEIAPS FVFLASNQDS SYMSGQILHV NGGVIVNS

Best Arabidopsis Sequence Match ( AT1G54870.1 )
(BLAST)

001: MNVLCRVFTS SRVLSSNVTF SFSQIPNNTK KPLLEKRRLS PRVCLRAMAS EKQKQHAQPG KEHVMESSPQ FSSSDYQPSN KLRGKVALIT GGDSGIGRAV
101: GYCFASEGAT VAFTYVKGQE EKDAQETLQM LKEVKTSDSK EPIAIPTDLG FDENCKRVVD EVVNAFGRID VLINNAAEQY ESSTIEEIDE PRLERVFRTN
201: IFSYFFLTRH ALKHMKEGSS IINTTSVNAY KGNASLLDYT ATKGAIVAFT RGLALQLAEK GIRVNGVAPG PIWTPLIPAS FNEEKIKNFG SEVPMKRAGQ
301: PIEVAPSYVF LACNHCSSYF TGQVLHPNGG AVVNA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G54870]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.