Factsheet for Zm00001d026290_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11416	Sorghum	mitochondrion, peroxisome, plastid	97.65	97.98
Os04t0614000-01	Rice	cytosol	91.61	91.3
HORVU2Hr1G098920.1	Barley	peroxisome	89.6	89.3
TraesCS2D01G418900.1	Wheat	peroxisome	89.26	88.96
TraesCS2B01G441000.1	Wheat	peroxisome	89.26	88.96
TraesCS2A01G422500.1	Wheat	golgi, peroxisome	89.26	88.96
Zm00001d002332_P026	Maize	peroxisome	88.25	88.55
GSMUA_Achr2P01480_001	Banana	peroxisome	78.52	78.79
GSMUA_Achr3P23590_001	Banana	peroxisome	78.19	78.45
VIT_17s0000g08740.t01	Wine grape	cytosol	31.88	77.24
PGSC0003DMT400056868	Potato	cytosol, peroxisome, plastid	43.29	75.44
Solyc07g066630.2.1	Tomato	plastid	72.82	72.58
KRH13054	Soybean	nucleus	72.15	72.15
KRH44885	Soybean	nucleus	71.81	71.81
AT3G12800.1	Thale cress	peroxisome	71.48	71.48
CDY08402	Canola	cytosol	69.46	70.41
Bra034728.1-P	Field mustard	cytosol	69.46	70.41
CDX73802	Canola	peroxisome	70.13	70.13
CDY00799	Canola	peroxisome	69.8	69.8
Bra001471.1-P	Field mustard	peroxisome	69.46	69.46
Zm00001d019439_P001	Maize	extracellular	26.51	31.23
Zm00001d007687_P001	Maize	extracellular	26.17	29.66
Zm00001d028575_P001	Maize	extracellular	24.83	27.11
Zm00001d048723_P001	Maize	mitochondrion	23.83	26.89
Zm00001d038897_P001	Maize	peroxisome	25.17	26.88
Zm00001d011930_P001	Maize	mitochondrion, plastid	24.16	25.71
Zm00001d048726_P001	Maize	cytosol	18.46	24.55
Zm00001d006796_P001	Maize	extracellular	25.5	21.23

Protein Annotations

EMBL:BT064813	EnsemblPlants:Zm00001d026290_P001	EnsemblPlants:Zm00001d026290_T001	EnsemblPlantsGene:Zm00001d026290	EntrezGene:103504713	Gene3D:3.40.50.720
InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43296	PANTHER:PTHR43296:SF1	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ProteinID:AQK46085.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000194B386	UniProt:C0P944
MapMan:5.7.3.5.3	:	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr10:+:142970716..142981629

Molecular Weight (calculated)

31736.6 Da

IEP (calculated)

10.042

GRAVY (calculated)

-0.087

Length

298 amino acids

Sequence
(BLAST)

001: MESPFRADLL RGKAALVTGG GSGIGFEIAA QLARHGAHVA LMGRRREVLD KAVAALRSEG LRAVGFDGDV RKQEDAARVI AATVEHFGKL DILVNGAAGN
101: FLASPEDLKP KGFRTVLDID TVGTYTMCYE ALKYLKKGGP GRGPSSGGLI INISATLQYT AAWYQIHVSA AKAGVDGITR SLALEWGTDY DIRVNGIAPG
201: PIQDTPGMRK LAPEEMGNKG KRETMPLFKL GEKWDIAMAA LYLASDAGKY VNGAIIIVDG GLWLSRPRHI PKEEVKALSK VVEKKVRASG VGVPSSKL

Best Arabidopsis Sequence Match ( AT3G12800.1 )
(BLAST)

001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL

Arabidopsis Description

SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.