Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001471.1-P | Field mustard | peroxisome | 98.66 | 98.66 |
| CDY00799 | Canola | peroxisome | 97.99 | 97.99 |
| CDY08402 | Canola | cytosol | 89.26 | 90.48 |
| AT3G12800.1 | Thale cress | peroxisome | 89.93 | 89.93 |
| VIT_19s0085g00500.t01 | Wine grape | peroxisome | 83.22 | 83.5 |
| KRH13054 | Soybean | nucleus | 83.22 | 83.22 |
| KRH44885 | Soybean | nucleus | 81.21 | 81.21 |
| Solyc07g066630.2.1 | Tomato | plastid | 78.86 | 78.6 |
| PGSC0003DMT400056868 | Potato | cytosol, peroxisome, plastid | 44.97 | 78.36 |
| GSMUA_Achr3P23590_001 | Banana | peroxisome | 77.52 | 77.78 |
| VIT_01s0011g01520.t01 | Wine grape | peroxisome | 76.51 | 76.77 |
| GSMUA_Achr2P01480_001 | Banana | peroxisome | 75.84 | 76.09 |
| Os04t0614000-01 | Rice | cytosol | 72.48 | 72.24 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 71.81 | 71.57 |
| TraesCS2D01G418900.1 | Wheat | peroxisome | 71.81 | 71.57 |
| HORVU2Hr1G098920.1 | Barley | peroxisome | 71.48 | 71.24 |
| EES11416 | Sorghum | mitochondrion, peroxisome, plastid | 70.81 | 71.04 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 71.14 | 70.9 |
| EES11417 | Sorghum | peroxisome | 70.47 | 70.71 |
| Zm00001d026290_P001 | Maize | peroxisome | 70.13 | 70.13 |
| Zm00001d002332_P026 | Maize | peroxisome | 68.46 | 68.69 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 10.4 | 29.52 |
| CDY43488 | Canola | cytosol | 28.52 | 29.41 |
| CDY16690 | Canola | peroxisome | 24.83 | 29.02 |
| CDY40186 | Canola | cytosol | 20.13 | 28.99 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 27.85 | 28.92 |
| CDX94534 | Canola | peroxisome | 24.5 | 28.63 |
| CDY04975 | Canola | mitochondrion | 10.74 | 28.57 |
| CDY45432 | Canola | cytosol | 24.83 | 28.24 |
| CDY35231 | Canola | peroxisome | 11.74 | 28.23 |
| CDX70101 | Canola | peroxisome | 24.16 | 27.48 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 24.16 | 27.48 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 26.51 | 27.34 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 23.49 | 27.24 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 23.49 | 27.13 |
| CDY06706 | Canola | mitochondrion | 24.16 | 27.07 |
| CDX98899 | Canola | peroxisome | 23.49 | 26.72 |
| CDY16437 | Canola | mitochondrion | 23.83 | 26.69 |
| CDY52942 | Canola | mitochondrion | 23.83 | 26.69 |
| CDY14094 | Canola | peroxisome | 23.49 | 26.62 |
| CDY04977 | Canola | peroxisome | 23.49 | 26.62 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 22.82 | 25.95 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 22.82 | 25.95 |
| CDY14610 | Canola | mitochondrion | 23.15 | 25.94 |
| CDY10276 | Canola | mitochondrion | 23.15 | 25.94 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 22.48 | 25.57 |
| CDY40185 | Canola | plastid | 22.48 | 25.57 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 22.48 | 25.48 |
| CDY45433 | Canola | cytosol | 20.81 | 25.31 |
| CDY09917 | Canola | cytosol | 22.15 | 25.19 |
| CDX83306 | Canola | plastid | 22.15 | 25.19 |
| CDY68057 | Canola | cytosol | 22.15 | 25.19 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 22.15 | 25.19 |
| CDY31774 | Canola | cytosol | 19.8 | 25.11 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 21.81 | 24.81 |
| CDY40175 | Canola | plasma membrane | 21.81 | 24.81 |
| CDX97895 | Canola | cytosol | 19.46 | 24.68 |
| CDY06260 | Canola | plastid | 21.48 | 24.43 |
| CDY35991 | Canola | plastid | 10.07 | 24.19 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 21.14 | 24.14 |
| CDY31770 | Canola | plastid | 18.79 | 24.14 |
| CDX83307 | Canola | peroxisome | 21.14 | 24.05 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 21.14 | 24.05 |
| CDY45438 | Canola | cytosol | 21.14 | 24.05 |
| CDY40165 | Canola | plastid | 21.14 | 24.05 |
| CDY51372 | Canola | plastid | 22.48 | 24.01 |
| CDY64214 | Canola | mitochondrion | 13.76 | 23.98 |
| CDY31773 | Canola | plastid | 20.81 | 23.66 |
| CDX95751 | Canola | peroxisome | 20.81 | 23.66 |
| CDX97899 | Canola | peroxisome | 20.81 | 23.66 |
| CDY40183 | Canola | plastid | 20.81 | 23.66 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 20.81 | 23.66 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 21.48 | 23.62 |
| CDY09824 | Canola | mitochondrion | 21.48 | 23.62 |
| CDY09823 | Canola | peroxisome | 21.48 | 23.62 |
| CDX97893 | Canola | mitochondrion | 21.48 | 23.62 |
| CDX97897 | Canola | cytosol, extracellular | 18.12 | 23.38 |
| CDX95752 | Canola | cytosol | 18.46 | 23.11 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.37 | 22.86 |
| CDY40171 | Canola | cytosol | 16.78 | 22.62 |
| CDY05152 | Canola | cytosol | 18.12 | 22.59 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 19.8 | 22.52 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 23.15 | 22.26 |
| CDX95750 | Canola | cytosol | 19.8 | 21.53 |
| CDY45441 | Canola | cytosol | 16.11 | 21.43 |
| CDY72061 | Canola | cytosol | 7.38 | 20.18 |
| CDX97890 | Canola | cytosol | 22.48 | 19.76 |
| CDY40177 | Canola | cytosol | 17.79 | 19.13 |
| CDY65683 | Canola | cytosol, mitochondrion | 24.83 | 18.55 |
| CDY31767 | Canola | plastid | 23.15 | 12.26 |
| CDY50145 | Canola | plastid | 22.48 | 9.25 |
Protein Annotations
| EnsemblPlants:CDX73802 | EnsemblPlantsGene:GSBRNA2T00111495001 | Gene3D:3.40.50.720 | GO:A0A078CAA8 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR43296 | PANTHER:PTHR43296:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDX73802 |
| ProteinID:CDX73802.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EE032D | MapMan:5.7.3.5.3 | : |
Description
BnaA03g32450D
Coordinates
chrLK031800:+:6149..7751
Molecular Weight (calculated)
31821.4 Da
IEP (calculated)
9.728
GRAVY (calculated)
-0.133
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPFKPDVL KGKVALITGG GSGIGFEIST QFGKHGASIA IMGRRKQVLD AAVSDLRSLG IPAIGLEGDV RKPEDAKRVV ESTYQHFGRI DILINAAAGN
101: FLSAAEDLST NGFRTVLDID AVGTFNMCHE ALKYLKKGGP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YEIRVNGIAP
201: GPIGGTPGMS KLVPDEIQNK TRELMPLYKL GEKWDIAMAA LYLSGDTGKY VNGLTMVVDG GLWLSKPRHL AKEAVKELSR VVEKRSRAKP VGLPTSKL
101: FLSAAEDLST NGFRTVLDID AVGTFNMCHE ALKYLKKGGP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YEIRVNGIAP
201: GPIGGTPGMS KLVPDEIQNK TRELMPLYKL GEKWDIAMAA LYLSGDTGKY VNGLTMVVDG GLWLSKPRHL AKEAVKELSR VVEKRSRAKP VGLPTSKL
001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
Arabidopsis Description
SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.