Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P23590_001 | Banana | peroxisome | 87.21 | 87.21 |
Os04t0614000-01 | Rice | cytosol | 80.47 | 79.93 |
VIT_19s0085g00500.t01 | Wine grape | peroxisome | 79.46 | 79.46 |
EES11416 | Sorghum | mitochondrion, peroxisome, plastid | 78.79 | 78.79 |
HORVU2Hr1G098920.1 | Barley | peroxisome | 79.12 | 78.6 |
Zm00001d026290_P001 | Maize | peroxisome | 78.79 | 78.52 |
TraesCS2D01G418900.1 | Wheat | peroxisome | 78.79 | 78.26 |
TraesCS2B01G441000.1 | Wheat | peroxisome | 78.79 | 78.26 |
Solyc07g066630.2.1 | Tomato | plastid | 78.45 | 77.93 |
VIT_01s0011g01520.t01 | Wine grape | peroxisome | 77.78 | 77.78 |
EES11417 | Sorghum | peroxisome | 77.78 | 77.78 |
TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 78.11 | 77.59 |
Zm00001d002332_P026 | Maize | peroxisome | 77.44 | 77.44 |
CDX73802 | Canola | peroxisome | 76.09 | 75.84 |
KRH13054 | Soybean | nucleus | 75.76 | 75.5 |
PGSC0003DMT400056868 | Potato | cytosol, peroxisome, plastid | 43.43 | 75.44 |
Bra001471.1-P | Field mustard | peroxisome | 75.42 | 75.17 |
CDY00799 | Canola | peroxisome | 75.42 | 75.17 |
KRH44885 | Soybean | nucleus | 75.08 | 74.83 |
AT3G12800.1 | Thale cress | peroxisome | 74.75 | 74.5 |
Bra034728.1-P | Field mustard | cytosol | 73.4 | 74.15 |
CDY08402 | Canola | cytosol | 73.4 | 74.15 |
GSMUA_Achr3P01040_001 | Banana | cytosol | 9.76 | 30.21 |
GSMUA_Achr9P03470_001 | Banana | cytosol | 26.6 | 29.37 |
GSMUA_Achr9P03440_001 | Banana | cytosol | 25.93 | 28.41 |
GSMUA_Achr11P... | Banana | cytosol | 24.92 | 27.61 |
GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 24.24 | 27.48 |
GSMUA_Achr10P... | Banana | cytosol | 24.92 | 27.31 |
GSMUA_Achr5P04570_001 | Banana | cytosol | 11.11 | 25.98 |
GSMUA_Achr3P01030_001 | Banana | mitochondrion | 18.86 | 25.34 |
GSMUA_Achr4P24690_001 | Banana | cytosol | 24.58 | 24.5 |
GSMUA_Achr9P03420_001 | Banana | mitochondrion | 23.57 | 23.26 |
GSMUA_Achr4P29030_001 | Banana | cytosol | 22.22 | 22.6 |
GSMUA_Achr5P04560_001 | Banana | cytosol | 24.92 | 21.45 |
GSMUA_Achr6P34030_001 | Banana | cytosol | 23.91 | 19.61 |
GSMUA_Achr1P18200_001 | Banana | cytosol | 10.77 | 18.39 |
GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 27.27 | 17.2 |
GSMUA_Achr10P... | Banana | cytosol | 25.93 | 14.29 |
Protein Annotations
EnsemblPlants:GSMUA_Achr2P01480_001 | EnsemblPlants:GSMUA_Achr2T01480_001 | EnsemblPlantsGene:GSMUA_Achr2G01480_001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
PANTHER:PTHR43296 | PANTHER:PTHR43296:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg |
SUPFAM:SSF51735 | UniParc:UPI000295837C | UniProt:M0S489 | MapMan:5.7.3.5.3 | : | : |
Description
Peroxisomal 2,4-dienoyl-CoA reductase [Source:GMGC_GENE;Acc:GSMUA_Achr2G01480_001]
Coordinates
chr2:-:7206299..7209953
Molecular Weight (calculated)
31764.4 Da
IEP (calculated)
9.790
GRAVY (calculated)
-0.147
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPFKADIL KGKVALVTGG GSGIGLEIST QFGRHGAAVA IMGRRRQVLD AAVAALRSEG IRAIGLEGDV RKQEDAARVL EETTTHFGKL DILVNGAAGN
101: FLVSPEDLSP NGFRTVIDID SVGTFTMCHE ALKHLKKGGR GEGPSTGGLI LNISATLHYT AAWYQIHASA AKAAVDSITR SLALEWGTDY DIRVNGIAPG
201: PIGDTPGMRK LAPGEMQSKS REYRPLYKLG ERWDIAMAAL YLASDAGKYI NGTTMVVDGG LWLSHPRHIG KEEVKKLSKV VEMKSRKSPV AFPASKL
101: FLVSPEDLSP NGFRTVIDID SVGTFTMCHE ALKHLKKGGR GEGPSTGGLI LNISATLHYT AAWYQIHASA AKAAVDSITR SLALEWGTDY DIRVNGIAPG
201: PIGDTPGMRK LAPGEMQSKS REYRPLYKLG ERWDIAMAAL YLASDAGKYI NGTTMVVDGG LWLSHPRHIG KEEVKKLSKV VEMKSRKSPV AFPASKL
001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
Arabidopsis Description
SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.