Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P01030_001 | Banana | mitochondrion | 33.33 | 26.24 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 28.16 | 18.22 |
| GSMUA_Achr10P... | Banana | cytosol | 25.86 | 16.61 |
| GSMUA_Achr11P... | Banana | cytosol | 25.29 | 16.42 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 24.71 | 16.41 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 27.59 | 15.95 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 24.71 | 15.87 |
| GSMUA_Achr4P24690_001 | Banana | cytosol | 22.99 | 13.42 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 24.71 | 12.46 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 25.86 | 12.43 |
| GSMUA_Achr3P23590_001 | Banana | peroxisome | 19.54 | 11.45 |
| GSMUA_Achr2P01480_001 | Banana | peroxisome | 18.39 | 10.77 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 28.16 | 10.4 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 7.47 | 10.24 |
| GSMUA_Achr4P29030_001 | Banana | cytosol | 16.67 | 9.93 |
| GSMUA_Achr10P... | Banana | cytosol | 26.44 | 8.53 |
| GSMUA_Achr3P01040_001 | Banana | cytosol | 3.45 | 6.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P18200_001 | EnsemblPlants:GSMUA_Achr1T18200_001 | EnsemblPlantsGene:GSMUA_Achr1G18200_001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR43943 | PANTHER:PTHR43943:SF2 | PFAM:PF13561 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI0002969D13 | UniProt:M0S0X8 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G18200_001]
Coordinates
chr1:-:13610952..13613509
Molecular Weight (calculated)
19770.7 Da
IEP (calculated)
9.540
GRAVY (calculated)
0.194
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKIKSNWT KEEGGVCQVN AWFCIIRNMP YLRILTSCLL QAAASYLKTG SSVILISSIA GYLPQSSMAM YGVTKTALLE LTKALISFLL FRSMLNCLAP
101: GFVPTHFADF ITKMMPSEKP ERRRLCLRGP GLRKTWLLPQ PFWHLMIHPT FLEKHLWLPE GCLPGYNPFP DFTL
101: GFVPTHFADF ITKMMPSEKP ERRRLCLRGP GLRKTWLLPQ PFWHLMIHPT FLEKHLWLPE GCLPGYNPFP DFTL
001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
Arabidopsis Description
SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.