Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G441000.1 | Wheat | peroxisome | 99.0 | 99.0 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 99.0 | 99.0 |
| HORVU2Hr1G098920.1 | Barley | peroxisome | 98.66 | 98.66 |
| Zm00001d002332_P026 | Maize | peroxisome | 91.3 | 91.92 |
| Os04t0614000-01 | Rice | cytosol | 90.97 | 90.97 |
| EES11417 | Sorghum | peroxisome | 89.63 | 90.24 |
| Zm00001d026290_P001 | Maize | peroxisome | 88.96 | 89.26 |
| EES11416 | Sorghum | mitochondrion, peroxisome, plastid | 88.29 | 88.89 |
| GSMUA_Achr2P01480_001 | Banana | peroxisome | 78.26 | 78.79 |
| GSMUA_Achr3P23590_001 | Banana | peroxisome | 77.26 | 77.78 |
| VIT_17s0000g08740.t01 | Wine grape | cytosol | 31.1 | 75.61 |
| PGSC0003DMT400056868 | Potato | cytosol, peroxisome, plastid | 41.81 | 73.1 |
| CDX73802 | Canola | peroxisome | 71.57 | 71.81 |
| CDY08402 | Canola | cytosol | 70.57 | 71.77 |
| Bra034728.1-P | Field mustard | cytosol | 70.57 | 71.77 |
| CDY00799 | Canola | peroxisome | 71.24 | 71.48 |
| Bra001471.1-P | Field mustard | peroxisome | 70.9 | 71.14 |
| Solyc07g066630.2.1 | Tomato | plastid | 70.9 | 70.9 |
| AT3G12800.1 | Thale cress | peroxisome | 69.9 | 70.13 |
| KRH13054 | Soybean | nucleus | 69.9 | 70.13 |
| KRH44885 | Soybean | nucleus | 68.23 | 68.46 |
| TraesCS1D01G391900.1 | Wheat | mitochondrion | 9.7 | 31.18 |
| TraesCS5D01G545700.1 | Wheat | peroxisome | 26.09 | 29.66 |
| TraesCS5D01G530100.1 | Wheat | peroxisome | 25.75 | 29.62 |
| TraesCS3D01G396800.1 | Wheat | extracellular, mitochondrion, plastid | 25.42 | 28.9 |
| TraesCS5D01G169300.1 | Wheat | peroxisome | 24.41 | 28.85 |
| TraesCS5D01G545800.1 | Wheat | cytosol, mitochondrion, plastid | 24.75 | 28.03 |
| TraesCS1D01G398800.1 | Wheat | mitochondrion | 24.41 | 27.97 |
| TraesCS2D01G497300.1 | Wheat | cytosol, peroxisome, plastid | 24.41 | 27.76 |
| TraesCS4D01G134700.1 | Wheat | peroxisome | 25.42 | 27.54 |
| TraesCS3D01G440700.1 | Wheat | peroxisome | 25.08 | 27.27 |
| TraesCS5D01G316400.1 | Wheat | cytosol, peroxisome, plastid | 23.75 | 27.2 |
| TraesCS4D01G309300.1 | Wheat | cytosol, peroxisome, plastid | 23.75 | 27.0 |
| TraesCS3D01G396900.1 | Wheat | mitochondrion, plastid | 23.75 | 27.0 |
| TraesCS1D01G398900.1 | Wheat | peroxisome | 15.72 | 26.26 |
| TraesCS5D01G037500.1 | Wheat | plastid | 22.74 | 25.86 |
| TraesCS4D01G210800.1 | Wheat | plastid | 23.41 | 25.74 |
| TraesCS2D01G366000.2 | Wheat | peroxisome | 23.75 | 23.36 |
| TraesCS4D01G210700.1 | Wheat | plastid | 22.74 | 21.45 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 24.41 | 21.04 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G418900.1 | EnsemblPlantsGene:TraesCS2D01G418900 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43296 |
| PANTHER:PTHR43296:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| TIGR:cd05369 | MapMan:5.7.3.5.3 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:533066362..533068433
Molecular Weight (calculated)
31738.5 Da
IEP (calculated)
9.617
GRAVY (calculated)
-0.067
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MATESPFRAD VLKGKAALVT GGGSGICFEI AAQLARHGAH VAIMGRRREV LDKAVAALRS EGLRAVGFQG DVRNQEDAAR VLASTVEHFG KLDILVNGAA
101: GNFLASPEDL TPKGFRTVLE IDTVGTYTMC YEALKYLKKG GPGRGPSTGG LIINISATLH YTASWYQIHV SAAKAGVDSI TRTLALEWGT DYEIRVNGIA
201: PGPIGGTPGL RKLAPDEMGK GKREMMPLFK LGETQDIAMA ALYLASDAGK YVNGTTLVVD GGLWLSHPRH IPKEEVKELS KVIEKKVRAS GVGVPSSKL
101: GNFLASPEDL TPKGFRTVLE IDTVGTYTMC YEALKYLKKG GPGRGPSTGG LIINISATLH YTASWYQIHV SAAKAGVDSI TRTLALEWGT DYEIRVNGIA
201: PGPIGGTPGL RKLAPDEMGK GKREMMPLFK LGETQDIAMA ALYLASDAGK YVNGTTLVVD GGLWLSHPRH IPKEEVKELS KVIEKKVRAS GVGVPSSKL
001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
Arabidopsis Description
SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.