Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034728.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX73802 | Canola | peroxisome | 90.48 | 89.26 |
| CDY00799 | Canola | peroxisome | 89.46 | 88.25 |
| AT3G12800.1 | Thale cress | peroxisome | 88.78 | 87.58 |
| KRH13054 | Soybean | nucleus | 82.31 | 81.21 |
| VIT_19s0085g00500.t01 | Wine grape | peroxisome | 81.97 | 81.14 |
| KRH44885 | Soybean | nucleus | 80.61 | 79.53 |
| PGSC0003DMT400056868 | Potato | cytosol, peroxisome, plastid | 44.56 | 76.61 |
| Solyc07g066630.2.1 | Tomato | plastid | 77.55 | 76.25 |
| GSMUA_Achr3P23590_001 | Banana | peroxisome | 76.87 | 76.09 |
| VIT_01s0011g01520.t01 | Wine grape | peroxisome | 74.15 | 73.4 |
| GSMUA_Achr2P01480_001 | Banana | peroxisome | 74.15 | 73.4 |
| Os04t0614000-01 | Rice | cytosol | 72.45 | 71.24 |
| TraesCS2D01G418900.1 | Wheat | peroxisome | 71.77 | 70.57 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 71.43 | 70.23 |
| EES11416 | Sorghum | mitochondrion, peroxisome, plastid | 70.75 | 70.03 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 71.09 | 69.9 |
| HORVU2Hr1G098920.1 | Barley | peroxisome | 71.09 | 69.9 |
| Zm00001d026290_P001 | Maize | peroxisome | 70.41 | 69.46 |
| EES11417 | Sorghum | peroxisome | 70.07 | 69.36 |
| Zm00001d002332_P026 | Maize | peroxisome | 68.37 | 67.68 |
| CDY40186 | Canola | cytosol | 20.41 | 28.99 |
| CDY16690 | Canola | peroxisome | 24.49 | 28.24 |
| CDY45432 | Canola | cytosol | 24.83 | 27.86 |
| CDX94534 | Canola | peroxisome | 24.15 | 27.84 |
| CDY43488 | Canola | cytosol | 27.21 | 27.68 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 24.49 | 27.48 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 26.53 | 27.18 |
| CDX70101 | Canola | peroxisome | 24.15 | 27.1 |
| CDY06706 | Canola | mitochondrion | 24.15 | 26.69 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 9.52 | 26.67 |
| CDY35231 | Canola | peroxisome | 11.22 | 26.61 |
| CDX98899 | Canola | peroxisome | 23.47 | 26.34 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 23.47 | 26.24 |
| CDY04977 | Canola | peroxisome | 23.47 | 26.24 |
| CDY31774 | Canola | cytosol | 20.75 | 25.96 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 25.51 | 25.95 |
| CDY16437 | Canola | mitochondrion | 23.47 | 25.94 |
| CDY52942 | Canola | mitochondrion | 23.47 | 25.94 |
| CDY04975 | Canola | mitochondrion | 9.86 | 25.89 |
| CDY14094 | Canola | peroxisome | 23.13 | 25.86 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 22.45 | 25.68 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 22.45 | 25.58 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 22.79 | 25.57 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 22.79 | 25.57 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 22.79 | 25.57 |
| CDY10276 | Canola | mitochondrion | 23.13 | 25.56 |
| CDY14610 | Canola | mitochondrion | 23.13 | 25.56 |
| CDX97895 | Canola | cytosol | 20.41 | 25.53 |
| CDY45433 | Canola | cytosol | 21.09 | 25.31 |
| CDX83306 | Canola | plastid | 22.45 | 25.19 |
| CDY40175 | Canola | plasma membrane | 22.45 | 25.19 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 22.45 | 25.19 |
| CDY40185 | Canola | plastid | 22.45 | 25.19 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 22.11 | 24.81 |
| CDY09917 | Canola | cytosol | 22.11 | 24.81 |
| CDY31770 | Canola | plastid | 19.39 | 24.57 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 21.77 | 24.52 |
| CDY45438 | Canola | cytosol | 21.77 | 24.43 |
| CDY40165 | Canola | plastid | 21.77 | 24.43 |
| CDY68057 | Canola | cytosol | 21.77 | 24.43 |
| CDX83307 | Canola | peroxisome | 21.77 | 24.43 |
| CDY51372 | Canola | plastid | 23.13 | 24.37 |
| CDY35991 | Canola | plastid | 10.2 | 24.19 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 21.43 | 24.05 |
| CDX97899 | Canola | peroxisome | 21.43 | 24.05 |
| CDY31773 | Canola | plastid | 21.43 | 24.05 |
| CDY06260 | Canola | plastid | 21.43 | 24.05 |
| CDY40183 | Canola | plastid | 21.43 | 24.05 |
| CDY64214 | Canola | mitochondrion | 13.95 | 23.98 |
| CDX95752 | Canola | cytosol | 19.39 | 23.95 |
| CDX95751 | Canola | peroxisome | 21.09 | 23.66 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 21.09 | 23.66 |
| CDY09823 | Canola | peroxisome | 21.77 | 23.62 |
| CDY09824 | Canola | mitochondrion | 21.77 | 23.62 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 21.77 | 23.62 |
| CDX97893 | Canola | mitochondrion | 21.77 | 23.62 |
| CDY40171 | Canola | cytosol | 17.69 | 23.53 |
| CDX97897 | Canola | cytosol, extracellular | 18.03 | 22.94 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 20.41 | 22.9 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.44 | 22.86 |
| CDY72061 | Canola | cytosol | 8.16 | 22.02 |
| CDX95750 | Canola | cytosol | 20.41 | 21.9 |
| CDY45441 | Canola | cytosol | 16.67 | 21.88 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 22.79 | 21.61 |
| CDY05152 | Canola | cytosol | 17.35 | 21.34 |
| CDX97890 | Canola | cytosol | 23.13 | 20.06 |
| CDY40177 | Canola | cytosol | 18.71 | 19.86 |
| CDY65683 | Canola | cytosol, mitochondrion | 24.49 | 18.05 |
| CDY31767 | Canola | plastid | 23.81 | 12.43 |
| CDY50145 | Canola | plastid | 23.13 | 9.39 |
Protein Annotations
| EnsemblPlants:CDY08402 | EnsemblPlantsGene:GSBRNA2T00000156001 | Gene3D:3.40.50.720 | GO:A0A078F5N2 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR43296 | PANTHER:PTHR43296:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY08402 |
| ProteinID:CDY08402.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0002548186 | UniProt:A0A078F5N2 | MapMan:5.7.3.5.3 |
Description
BnaA05g26380DBnaA05g26380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5N2]
Coordinates
chrLK031986:+:51258..54107
Molecular Weight (calculated)
31351.6 Da
IEP (calculated)
9.442
GRAVY (calculated)
-0.170
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSPFKPDVL KGKVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD AAVSDLRSLG IPAVGFEGDV RKPEDARRVV ESTFNHFGKV DILVNAAAGN
101: FLAAAEDLST NGFRTVLDID AVGTFNMCRE ALKYLKKGGP GRDASSGGGS ILNISATLHY TASWYQIHVS AAKAAVDAAT RNLALEWGTD YEIRVNGIAP
201: GPIGGTPGMS KLGPDEIENK AGDYIPLYKL GEKWDIAMAA LYLSCDSGKY VNGLTMVVDN GQWLSRPRHL PKEAVKELSR VVEKRSRAKP TSKL
101: FLAAAEDLST NGFRTVLDID AVGTFNMCRE ALKYLKKGGP GRDASSGGGS ILNISATLHY TASWYQIHVS AAKAAVDAAT RNLALEWGTD YEIRVNGIAP
201: GPIGGTPGMS KLGPDEIENK AGDYIPLYKL GEKWDIAMAA LYLSCDSGKY VNGLTMVVDN GQWLSRPRHL PKEAVKELSR VVEKRSRAKP TSKL
001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL
Arabidopsis Description
SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.