CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039966.1-P	Field mustard	cytosol	40.5	79.17
CDY45432	Canola	cytosol	35.35	75.95
CDY40188	Canola	cytosol, peroxisome, plasma membrane	35.35	75.95
CDY31772	Canola	cytosol, peroxisome, plastid	35.17	75.57
CDY45434	Canola	cytosol, nucleus, plastid	34.99	75.19
CDY45441	Canola	cytosol	29.84	75.0
CDY40183	Canola	plastid	34.81	74.81
CDY31773	Canola	plastid	34.64	74.43
CDY40175	Canola	plasma membrane	34.46	74.05
CDX97899	Canola	peroxisome	34.46	74.05
CDY31768	Canola	cytosol, peroxisome, plastid	34.28	73.66
CDY40186	Canola	cytosol	27.0	73.43
CDY40185	Canola	plastid	34.1	73.28
CDX95751	Canola	peroxisome	33.93	72.9
CDX83307	Canola	peroxisome	33.75	72.52
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	33.75	72.24
CDY45438	Canola	cytosol	33.57	72.14
CDX83306	Canola	plastid	33.57	72.14
CDY40182	Canola	cytosol, peroxisome, plastid	33.39	71.76
CDX97897	Canola	cytosol, extracellular	29.31	71.43
CDY45433	Canola	cytosol	31.08	71.43
CDY68057	Canola	cytosol	33.21	71.37
CDY40165	Canola	plastid	33.21	71.37
CDX86486	Canola	cytosol, peroxisome, plastid	33.21	71.37
CDX95753	Canola	cytosol, peroxisome, plastid	33.04	70.99
CDY40179	Canola	cytosol, peroxisome, plastid	32.86	70.88
CDY45435	Canola	cytosol, peroxisome, plastid	32.86	70.61
CDX86485	Canola	cytosol, peroxisome, plastid	32.86	70.61
CDY31774	Canola	cytosol	29.31	70.21
CDY09917	Canola	cytosol	32.5	69.85
CDX97895	Canola	cytosol	29.13	69.79
CDY40171	Canola	cytosol	27.18	69.23
CDY10276	Canola	mitochondrion	32.68	69.17
CDY14610	Canola	mitochondrion	32.68	69.17
CDY16437	Canola	mitochondrion	32.68	69.17
CDY06706	Canola	mitochondrion	32.68	69.17
CDY06260	Canola	plastid	32.15	69.08
CDY52942	Canola	mitochondrion	32.5	68.8
CDY64214	Canola	mitochondrion	20.6	67.84
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	30.02	67.06
VIT_06s0004g05400.t01	Wine grape	cytosol	13.14	66.67
CDX98899	Canola	peroxisome	30.91	66.41
CDY31770	Canola	plastid	27.35	66.38
VIT_06s0004g05310.t01	Wine grape	cytosol	13.14	65.49
Solyc03g096650.1.1	Tomato	cytosol	10.3	65.17
VIT_06s0004g05380.t01	Wine grape	plastid	31.08	64.81
VIT_06s0004g05370.t01	Wine grape	peroxisome	28.95	64.68
KRH24731	Soybean	nucleus	30.55	64.42
CDY04977	Canola	peroxisome	30.02	64.26
CDX70101	Canola	peroxisome	29.84	64.12
CDY14094	Canola	peroxisome	29.84	63.88
CDY09824	Canola	mitochondrion	30.55	63.47
CDX97893	Canola	mitochondrion	30.55	63.47
VIT_06s0004g05440.t01	Wine grape	cytosol	9.24	63.41
CDY09823	Canola	peroxisome	30.37	63.1
CDY16436	Canola	endoplasmic reticulum, vacuole	11.72	62.86
KRH24733	Soybean	nucleus	29.48	62.64
CDX95752	Canola	cytosol	26.47	62.6
VIT_06s0004g05330.t01	Wine grape	peroxisome	28.24	62.6
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	30.02	62.59
CDY31776	Canola	cytosol, peroxisome, plastid	30.02	62.36
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	29.31	61.34
CDX95750	Canola	cytosol	29.66	60.95
CDY51372	Canola	plastid	29.84	60.22
KRH29740	Soybean	cytosol	10.48	60.2
CDY04975	Canola	mitochondrion	11.9	59.82
CDY40177	Canola	cytosol	29.13	59.21
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	25.22	59.17
CDY72061	Canola	cytosol	11.37	58.72
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	24.33	55.69
CDY35991	Canola	plastid	12.26	55.65
VIT_06s0004g05450.t01	Wine grape	plasma membrane	16.7	52.22
CDX98898	Canola	cytosol, peroxisome, plasma membrane	28.06	50.97
GSMUA_Achr5P04570_001	Banana	cytosol	11.37	50.39
CDX97890	Canola	cytosol	29.84	49.56
CDY65683	Canola	cytosol, mitochondrion	33.04	46.62
CDY35231	Canola	peroxisome	8.17	37.1
CDY16690	Canola	peroxisome	15.1	33.33
CDX94534	Canola	peroxisome	15.1	33.33
CDX76382	Canola	cytosol, mitochondrion, peroxisome	14.56	31.91
CDY27447	Canola	cytosol, mitochondrion, peroxisome	14.56	31.78
CDY50145	Canola	plastid	39.79	30.94
CDY27781	Canola	cytosol, peroxisome, plastid	14.56	28.37
CDY43488	Canola	cytosol	14.21	27.68
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	13.68	26.83
CDY05152	Canola	cytosol	10.3	24.27
CDY08402	Canola	cytosol	12.43	23.81
CDY00799	Canola	peroxisome	12.26	23.15
CDX73802	Canola	peroxisome	12.26	23.15
CDY05153	Canola	cytosol, nucleus, plastid	2.84	22.86

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078H2M1	UniProt:A0A078H2M1	EnsemblPlants:CDY31767	ProteinID:CDY31767
ProteinID:CDY31767.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00050419001	InterPro:NAD(P)-bd_dom_sf
PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF2
InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI0004EED761	SEG:seg

Description

BnaA04g17030DBnaA04g17030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2M1]

Coordinates

chrLK032278:+:384776..387816

Molecular Weight (calculated)

60911.1 Da

IEP (calculated)

8.243

GRAVY (calculated)

0.157

Length

563 amino acids

Sequence
(BLAST)

001: MASRLYTNSP QNLHFVASST KTHSFKTSVT VRCASIATSP NNRWSLHGMS ALVTGGTRGI GRAIVEELVG LGAKVHTCAR NETELKESLR DWNRSGFQVD
101: GSVCDVSDRA QRESLMETVS SLFHGKLHIL VNNVGTNIRK PMVDFTPEEF STLLSTNFES VFHLCQLAYP MLRATEAGCV VSISSVSGFV SLKNMSVQSA
201: TKGAINQLTR NLACEWAKDN IRVNAVAPWY IKTSMVEQVL SNKDYLDEVY SVTPLGRLGE PREVSSAVAF LCLPASSYIT GQIVHGSRGC CYYPSYALVD
301: CFFFVTFASR WSLQGMTALV TGGARGIGFV FLLRSLYITI LPTVLLLFNI LTVQSLGFQV SGSVCDVSSR PERETLMQTV SSLFGGKLNV LVNNVGGVRA
401: KPTLEYTAED FSFHITTNLE SAYHLSQLSH PLLKASGSGS IVFISSIAGV VSAANYVSIY SATKGALNQL ARNLASEWAR DGIRANAVAP NVINTPLSQP
501: FLDDLGLKES LFSRTPLGRA GEPREVASLV VFLCLPAASY ITGQTICVDG GLTVNGFFYQ PQA

Best Arabidopsis Sequence Match ( AT2G29260.1 )
(BLAST)

001: MVLDMASHLY TNPPQNLHFI SSSSSLKPHL CLSFKRINPK HKSSSSSVFV PYASQSSIAI TSKERWSLNG MSALVTGGTR GIGRAIVEEL AGLGAEVHTC
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD

Arabidopsis Description

Tropinone reductase homolog At2g29260, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW12]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.