CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31774	Canola	cytosol	88.36	87.23
CDX97895	Canola	cytosol	87.93	86.81
Bra039969.1-P	Field mustard	cytosol	93.97	82.89
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	92.67	81.75
CDY40171	Canola	cytosol	73.71	77.38
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	81.03	71.76
CDY45438	Canola	cytosol	78.45	69.47
CDY40179	Canola	cytosol, peroxisome, plastid	78.02	69.35
CDY40165	Canola	plastid	77.16	68.32
CDY45441	Canola	cytosol	65.09	67.41
CDY40175	Canola	plasma membrane	75.86	67.18
CDY31772	Canola	cytosol, peroxisome, plastid	73.71	65.27
CDY45434	Canola	cytosol, nucleus, plastid	72.84	64.5
CDX97899	Canola	peroxisome	72.84	64.5
CDY45432	Canola	cytosol	72.41	64.12
CDY64214	Canola	mitochondrion	46.98	63.74
CDY31768	Canola	cytosol, peroxisome, plastid	71.98	63.74
CDY31773	Canola	plastid	71.98	63.74
CDY40183	Canola	plastid	71.98	63.74
CDX83306	Canola	plastid	71.12	62.98
CDY40188	Canola	cytosol, peroxisome, plasma membrane	71.12	62.98
CDX95753	Canola	cytosol, peroxisome, plastid	71.12	62.98
VIT_06s0004g05400.t01	Wine grape	cytosol	29.74	62.16
CDY40177	Canola	cytosol	74.14	62.09
CDX83307	Canola	peroxisome	69.4	61.45
CDY40185	Canola	plastid	68.97	61.07
CDX95751	Canola	peroxisome	68.53	60.69
CDX97897	Canola	cytosol, extracellular	60.34	60.61
VIT_06s0004g05310.t01	Wine grape	cytosol	29.31	60.18
CDY40186	Canola	cytosol	53.02	59.42
CDY40182	Canola	cytosol, peroxisome, plastid	66.81	59.16
CDY45433	Canola	cytosol	62.07	58.78
VIT_06s0004g05440.t01	Wine grape	cytosol	20.69	58.54
Solyc03g096650.1.1	Tomato	cytosol	22.41	58.43
CDY45435	Canola	cytosol, peroxisome, plastid	65.52	58.02
CDX86486	Canola	cytosol, peroxisome, plastid	65.09	57.63
CDY68057	Canola	cytosol	63.79	56.49
CDX86485	Canola	cytosol, peroxisome, plastid	63.36	56.11
CDY09917	Canola	cytosol	62.5	55.34
CDY72061	Canola	cytosol	25.86	55.05
CDY06260	Canola	plastid	61.64	54.58
CDY16437	Canola	mitochondrion	62.5	54.51
CDY52942	Canola	mitochondrion	62.5	54.51
CDY06706	Canola	mitochondrion	61.21	53.38
CDY14610	Canola	mitochondrion	60.78	53.01
CDY10276	Canola	mitochondrion	60.78	53.01
CDX95752	Canola	cytosol	53.45	52.1
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	56.03	51.59
VIT_06s0004g05380.t01	Wine grape	plastid	58.62	50.37
CDY09824	Canola	mitochondrion	58.19	49.82
CDX97893	Canola	mitochondrion	58.19	49.82
CDY09823	Canola	peroxisome	57.76	49.45
CDY31776	Canola	cytosol, peroxisome, plastid	57.33	49.08
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	56.9	48.89
VIT_06s0004g05330.t01	Wine grape	peroxisome	53.02	48.43
VIT_06s0004g05370.t01	Wine grape	peroxisome	52.16	48.02
KRH29740	Soybean	cytosol	20.26	47.96
KRH24731	Soybean	nucleus	55.17	47.94
CDY04977	Canola	peroxisome	53.88	47.53
KRH24733	Soybean	nucleus	53.88	47.17
CDY14094	Canola	peroxisome	53.02	46.77
CDX70101	Canola	peroxisome	52.59	46.56
CDX98899	Canola	peroxisome	52.59	46.56
CDX95750	Canola	cytosol	53.88	45.62
CDY51372	Canola	plastid	54.74	45.52
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	51.29	44.24
GSMUA_Achr5P04570_001	Banana	cytosol	23.28	42.52
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	43.97	42.5
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	43.97	41.46
CDX97890	Canola	cytosol	55.6	38.05
VIT_06s0004g05450.t01	Wine grape	plasma membrane	28.45	36.67
CDX98898	Canola	cytosol, peroxisome, plasma membrane	48.71	36.45
CDY65683	Canola	cytosol, mitochondrion	62.5	36.34
CDY16436	Canola	endoplasmic reticulum, vacuole	15.52	34.29
CDY35991	Canola	plastid	17.24	32.26
CDY04975	Canola	mitochondrion	15.09	31.25
CDY31767	Canola	plastid	66.38	27.35
CDY16690	Canola	peroxisome	28.88	26.27
CDX94534	Canola	peroxisome	28.88	26.27
CDY35231	Canola	peroxisome	12.93	24.19
CDX76382	Canola	cytosol, mitochondrion, peroxisome	26.72	24.12
CDY27447	Canola	cytosol, mitochondrion, peroxisome	26.72	24.03
CDY50145	Canola	plastid	73.28	23.48
CDY43488	Canola	cytosol	25.86	20.76
CDY27781	Canola	cytosol, peroxisome, plastid	25.86	20.76
CDY05153	Canola	cytosol, nucleus, plastid	6.03	20.0
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	24.57	19.86
CDY08402	Canola	cytosol	24.57	19.39
CDX73802	Canola	peroxisome	24.14	18.79
CDY00799	Canola	peroxisome	24.14	18.79
CDY05152	Canola	cytosol	18.53	17.99

Protein Annotations

EnsemblPlants:CDY31770	EnsemblPlantsGene:GSBRNA2T00050425001	Gene3D:3.40.50.720	GO:A0A078GZ64	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY31770
ProteinID:CDY31770.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EE370C	UniProt:A0A078GZ64	MapMan:50.1.1

Description

BnaA04g17060DBnaA04g17060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ64]

Coordinates

chrLK032278:-:405733..407373

Molecular Weight (calculated)

25134.9 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.037

Length

232 amino acids

Sequence
(BLAST)

001: MDNRWSLEGM TALVTGGASG IGHAIVEELA SFGARIHVFD ISETLLNQSL SEWEKKGFQV SGSICDVSSR PERETLMQTV SAIFDGKLSI LVNNVAVVHT
101: KPTTEYDAND FSFQISTNLE SAYHLSQLSH PLLKASGFGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRINSVAPN FVNKTTMAKP
201: FFKDTVKQNS TWSGWRAKRG LTVNGFSYQP NA

Best Arabidopsis Sequence Match ( AT2G29300.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.