Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31774 | Canola | cytosol | 83.27 | 93.19 |
| CDX97895 | Canola | cytosol | 82.89 | 92.77 |
| CDY31770 | Canola | plastid | 81.75 | 92.67 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 87.07 | 87.4 |
| CDY45438 | Canola | cytosol | 84.79 | 85.11 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 84.41 | 85.06 |
| CDY45441 | Canola | cytosol | 71.48 | 83.93 |
| CDY40165 | Canola | plastid | 82.89 | 83.21 |
| CDY40175 | Canola | plasma membrane | 82.51 | 82.82 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 79.09 | 79.39 |
| CDY40171 | Canola | cytosol | 66.54 | 79.19 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 78.33 | 78.63 |
| CDY40183 | Canola | plastid | 77.95 | 78.24 |
| CDX97899 | Canola | peroxisome | 77.95 | 78.24 |
| CDY45432 | Canola | cytosol | 77.57 | 77.86 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 76.81 | 77.1 |
| CDX83306 | Canola | plastid | 76.81 | 77.1 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 76.43 | 76.72 |
| CDY31773 | Canola | plastid | 76.43 | 76.72 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 76.05 | 76.34 |
| CDY40186 | Canola | cytosol | 59.32 | 75.36 |
| CDX97897 | Canola | cytosol, extracellular | 66.16 | 75.32 |
| CDX83307 | Canola | peroxisome | 74.9 | 75.19 |
| CDY40185 | Canola | plastid | 74.52 | 74.81 |
| CDX95751 | Canola | peroxisome | 73.76 | 74.05 |
| CDY45433 | Canola | cytosol | 68.06 | 73.06 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 71.86 | 72.14 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 71.48 | 71.76 |
| CDY40177 | Canola | cytosol | 74.9 | 71.12 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 69.2 | 69.47 |
| CDY68057 | Canola | cytosol | 68.06 | 68.32 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 67.68 | 67.94 |
| CDY09917 | Canola | cytosol | 67.68 | 67.94 |
| CDY06260 | Canola | plastid | 66.92 | 67.18 |
| CDY06706 | Canola | mitochondrion | 66.92 | 66.17 |
| CDY10276 | Canola | mitochondrion | 66.54 | 65.79 |
| CDY14610 | Canola | mitochondrion | 66.54 | 65.79 |
| CDY16437 | Canola | mitochondrion | 66.54 | 65.79 |
| CDX95752 | Canola | cytosol | 59.32 | 65.55 |
| CDY52942 | Canola | mitochondrion | 66.16 | 65.41 |
| CDY64214 | Canola | mitochondrion | 41.83 | 64.33 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 60.46 | 63.1 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 26.62 | 63.06 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 24.71 | 61.9 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.91 | 61.8 |
| CDX97893 | Canola | mitochondrion | 63.12 | 61.25 |
| CDY09824 | Canola | mitochondrion | 63.12 | 61.25 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 62.74 | 61.11 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 26.24 | 61.06 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 62.74 | 60.89 |
| CDY09823 | Canola | peroxisome | 62.74 | 60.89 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 57.79 | 60.32 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 57.79 | 59.84 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 18.63 | 59.76 |
| CDY04977 | Canola | peroxisome | 59.7 | 59.7 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 61.22 | 59.63 |
| KRH24731 | Soybean | nucleus | 60.08 | 59.18 |
| CDX70101 | Canola | peroxisome | 58.94 | 59.16 |
| CDX98899 | Canola | peroxisome | 58.94 | 59.16 |
| CDY14094 | Canola | peroxisome | 58.94 | 58.94 |
| CDY04975 | Canola | mitochondrion | 25.1 | 58.93 |
| KRH24733 | Soybean | nucleus | 58.94 | 58.49 |
| CDX95750 | Canola | cytosol | 59.32 | 56.93 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 58.17 | 56.88 |
| CDY51372 | Canola | plastid | 60.08 | 56.63 |
| CDY72061 | Canola | cytosol | 23.19 | 55.96 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 50.19 | 55.0 |
| CDY35991 | Canola | plastid | 25.86 | 54.84 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.43 | 52.85 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 34.98 | 51.11 |
| KRH29740 | Soybean | cytosol | 18.25 | 48.98 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 56.27 | 47.74 |
| CDX97890 | Canola | cytosol | 60.84 | 47.2 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.43 | 46.46 |
| CDY65683 | Canola | cytosol, mitochondrion | 66.92 | 44.11 |
| CDY35231 | Canola | peroxisome | 17.11 | 36.29 |
| CDY31767 | Canola | plastid | 72.24 | 33.75 |
| CDX94534 | Canola | peroxisome | 31.18 | 32.16 |
| CDY16690 | Canola | peroxisome | 31.18 | 32.16 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 29.28 | 29.96 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 29.28 | 29.84 |
| CDY50145 | Canola | plastid | 77.57 | 28.18 |
| CDY43488 | Canola | cytosol | 28.14 | 25.61 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.14 | 25.61 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 27.0 | 24.74 |
| CDY05152 | Canola | cytosol | 21.67 | 23.85 |
| CDY08402 | Canola | cytosol | 26.24 | 23.47 |
| CDY00799 | Canola | peroxisome | 25.48 | 22.48 |
| CDX73802 | Canola | peroxisome | 25.48 | 22.48 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.32 | 20.0 |
Protein Annotations
| EnsemblPlants:CDY62820 | EnsemblPlantsGene:GSBRNA2T00037634001 | Gene3D:3.40.50.720 | GO:A0A078JDZ1 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY62820 |
| ProteinID:CDY62820.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EDD582 | UniProt:A0A078JDZ1 | MapMan:50.1.1 |
Description
BnaC04g56400DBnaC04g56400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDZ1]
Coordinates
chrLK034198:-:20807..22482
Molecular Weight (calculated)
28099.5 Da
IEP (calculated)
5.625
GRAVY (calculated)
0.066
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNRWSLEGM TALVTGGASG IGHAIVEELA SFGARIHVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSR PERETLMQTV SAIFDGKLSI LVNNVAVVHT
101: KPTTEYDAND FSFQISTNLE SAYHLSQLSH PLLKASGFGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRTNSVAPN FVNNTTMAKP
201: FFKDADYEKS LLNRTPLGRA GEPNEVASLV AFLCLPAASY ITGQTICVDG GLTVNGFSYQ PKA
101: KPTTEYDAND FSFQISTNLE SAYHLSQLSH PLLKASGFGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRTNSVAPN FVNNTTMAKP
201: FFKDADYEKS LLNRTPLGRA GEPNEVASLV AFLCLPAASY ITGQTICVDG GLTVNGFSYQ PKA
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
Arabidopsis Description
Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.