Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018396.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 96.56 | 96.93 |
| CDY45441 | Canola | cytosol | 77.1 | 90.18 |
| CDY40165 | Canola | plastid | 90.08 | 90.08 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 85.11 | 84.79 |
| CDY40175 | Canola | plasma membrane | 83.59 | 83.59 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 83.21 | 83.21 |
| CDY31774 | Canola | cytosol | 74.05 | 82.55 |
| CDX97895 | Canola | cytosol | 73.66 | 82.13 |
| CDY40171 | Canola | cytosol | 67.18 | 79.64 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 79.39 | 79.39 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 79.01 | 79.01 |
| CDY45432 | Canola | cytosol | 78.63 | 78.63 |
| CDY31770 | Canola | plastid | 69.47 | 78.45 |
| CDY40183 | Canola | plastid | 78.24 | 78.24 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 78.24 | 78.24 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 77.48 | 77.48 |
| CDX83306 | Canola | plastid | 77.48 | 77.48 |
| CDY40177 | Canola | cytosol | 81.68 | 77.26 |
| CDY31773 | Canola | plastid | 77.1 | 77.1 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 76.72 | 76.72 |
| CDX97899 | Canola | peroxisome | 76.72 | 76.72 |
| CDX83307 | Canola | peroxisome | 76.34 | 76.34 |
| CDY40186 | Canola | cytosol | 60.31 | 76.33 |
| CDX97897 | Canola | cytosol, extracellular | 66.79 | 75.76 |
| CDX95751 | Canola | peroxisome | 75.57 | 75.57 |
| CDY40185 | Canola | plastid | 74.43 | 74.43 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 72.9 | 72.9 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 72.52 | 72.52 |
| CDY45433 | Canola | cytosol | 67.56 | 72.24 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 69.85 | 69.85 |
| CDY09917 | Canola | cytosol | 69.47 | 69.47 |
| CDY06260 | Canola | plastid | 69.08 | 69.08 |
| CDY06706 | Canola | mitochondrion | 69.47 | 68.42 |
| CDY10276 | Canola | mitochondrion | 69.08 | 68.05 |
| CDY14610 | Canola | mitochondrion | 69.08 | 68.05 |
| CDY68057 | Canola | cytosol | 67.94 | 67.94 |
| CDY16437 | Canola | mitochondrion | 68.7 | 67.67 |
| CDX95752 | Canola | cytosol | 61.45 | 67.65 |
| CDY64214 | Canola | mitochondrion | 43.89 | 67.25 |
| CDY52942 | Canola | mitochondrion | 67.94 | 66.92 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 66.79 | 66.79 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 59.92 | 62.3 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 26.34 | 62.16 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 59.16 | 61.51 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 24.43 | 60.95 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 62.98 | 60.89 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 62.6 | 60.74 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.61 | 60.67 |
| CDX97893 | Canola | mitochondrion | 62.6 | 60.52 |
| CDY09823 | Canola | peroxisome | 62.6 | 60.52 |
| CDY09824 | Canola | mitochondrion | 62.6 | 60.52 |
| CDX70101 | Canola | peroxisome | 60.31 | 60.31 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 25.95 | 60.18 |
| CDY04977 | Canola | peroxisome | 60.31 | 60.08 |
| KRH24731 | Soybean | nucleus | 61.07 | 59.93 |
| CDX98899 | Canola | peroxisome | 59.92 | 59.92 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 18.7 | 59.76 |
| CDY14094 | Canola | peroxisome | 59.54 | 59.32 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 61.07 | 59.26 |
| CDY04975 | Canola | mitochondrion | 25.19 | 58.93 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 56.49 | 58.27 |
| KRH24733 | Soybean | nucleus | 58.78 | 58.11 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 59.54 | 57.99 |
| CDX95750 | Canola | cytosol | 59.92 | 57.3 |
| CDY51372 | Canola | plastid | 60.31 | 56.63 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 51.53 | 56.25 |
| CDY72061 | Canola | cytosol | 22.52 | 54.13 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.62 | 52.85 |
| CDY35991 | Canola | plastid | 24.81 | 52.42 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.11 | 51.11 |
| KRH29740 | Soybean | cytosol | 18.7 | 50.0 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 56.11 | 47.42 |
| CDX97890 | Canola | cytosol | 60.31 | 46.61 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.52 | 46.46 |
| CDY65683 | Canola | cytosol, mitochondrion | 69.08 | 45.36 |
| CDY31767 | Canola | plastid | 72.14 | 33.57 |
| CDY35231 | Canola | peroxisome | 15.65 | 33.06 |
| CDX94534 | Canola | peroxisome | 29.39 | 30.2 |
| CDY16690 | Canola | peroxisome | 29.01 | 29.8 |
| CDY50145 | Canola | plastid | 78.24 | 28.31 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 27.48 | 28.02 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 27.48 | 27.91 |
| CDY43488 | Canola | cytosol | 28.24 | 25.61 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 27.48 | 24.91 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 27.1 | 24.74 |
| CDY05152 | Canola | cytosol | 20.99 | 23.01 |
| CDY08402 | Canola | cytosol | 24.43 | 21.77 |
| CDX73802 | Canola | peroxisome | 24.05 | 21.14 |
| CDY00799 | Canola | peroxisome | 24.05 | 21.14 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.96 | 18.57 |
Protein Annotations
| EnsemblPlants:CDY45438 | EnsemblPlantsGene:GSBRNA2T00082051001 | Gene3D:3.40.50.720 | GO:A0A078I8E2 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY45438 |
| ProteinID:CDY45438.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0002547D6F | UniProt:A0A078I8E2 | MapMan:50.1.1 |
Description
BnaA05g12630DBnaA05g12630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8E2]
Coordinates
chrLK032625:-:43657..45449
Molecular Weight (calculated)
27913.6 Da
IEP (calculated)
6.992
GRAVY (calculated)
0.127
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA SFGAIIHVCD ISETLLNKSL SIWEKKGFQV SGSICDVSSR PERETLMQTV SKMFDGKLSI LVNNVGGIRL
101: KPTTEYVAED FSFHISTNLE SAYHLSQLSH PLLKASGYGS IVMNSSVGGV VSMECGSLYG LSKGAMNQLA RSLACEWATD GIRTNSVAPN FILTDMTAPV
201: LGDACYRKSL FSRTPLGRAG EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP KP
101: KPTTEYVAED FSFHISTNLE SAYHLSQLSH PLLKASGYGS IVMNSSVGGV VSMECGSLYG LSKGAMNQLA RSLACEWATD GIRTNSVAPN FILTDMTAPV
201: LGDACYRKSL FSRTPLGRAG EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP KP
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
Arabidopsis Description
Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.