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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY40183
CDY45434

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G06060.1 CDY40183 AT2G29330.1 21798944
AT5G06060.1 CDY45434 AT2G29330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04977 Canola peroxisome 89.31 88.97
AT5G06060.1 Thale cress peroxisome 88.93 88.26
CDY14094 Canola peroxisome 88.55 88.21
CDX70101 Canola peroxisome 87.79 87.79
CDY04975 Canola mitochondrion 34.73 81.25
PGSC0003DMT400043159 Potato mitochondrion 71.76 69.89
Solyc03g096640.2.1 Tomato mitochondrion, plastid 71.37 69.78
VIT_13s0019g02180.t01 Wine grape peroxisome, plasma membrane, plastid 71.37 69.78
CDX98898 Canola cytosol, peroxisome, plasma membrane 81.68 69.03
GSMUA_Achr10P... Banana cytosol 69.08 66.79
CDY09917 Canola cytosol 66.41 66.41
HORVU4Hr1G060350.3 Barley plastid 67.94 65.44
CDY06260 Canola plastid 65.27 65.27
CDX86486 Canola cytosol, peroxisome, plastid 64.5 64.5
TraesCS4A01G094400.1 Wheat plastid 66.79 64.34
TraesCS4A01G094500.1 Wheat cytosol, peroxisome, plastid 66.41 64.21
CDY45434 Canola cytosol, nucleus, plastid 64.12 64.12
CDY68057 Canola cytosol 64.12 64.12
Zm00001d028575_P001 Maize extracellular 66.79 64.1
TraesCS4B01G210000.1 Wheat plastid 66.41 63.97
TraesCS4D01G210800.1 Wheat plastid 66.41 63.97
Os03t0268900-02 Rice plastid 65.65 63.7
TraesCS4B01G209900.1 Wheat peroxisome 65.65 63.7
KRH31007 Soybean mitochondrion 65.27 63.1
Solyc03g096660.1.1 Tomato extracellular 46.95 63.08
CDY31768 Canola cytosol, peroxisome, plastid 62.98 62.98
CDY40183 Canola plastid 62.98 62.98
CDX86485 Canola cytosol, peroxisome, plastid 62.6 62.6
KRG97856 Soybean mitochondrion, plastid 64.89 62.5
KRH31026 Soybean cytosol, mitochondrion, peroxisome, plastid 64.89 62.5
PGSC0003DMT400043152 Potato peroxisome 66.03 62.45
CDY06706 Canola mitochondrion 63.36 62.41
CDY31773 Canola plastid 62.21 62.21
CDY10276 Canola mitochondrion 62.98 62.03
CDY14610 Canola mitochondrion 62.98 62.03
CDY52942 Canola mitochondrion 62.98 62.03
CDX83307 Canola peroxisome 61.83 61.83
CDX95751 Canola peroxisome 61.83 61.83
CDX83306 Canola plastid 61.45 61.45
CDY31772 Canola cytosol, peroxisome, plastid 61.45 61.45
CDY40175 Canola plasma membrane 61.45 61.45
CDY40188 Canola cytosol, peroxisome, plasma membrane 61.45 61.45
KRH31025 Soybean plastid 64.89 61.37
CDY16437 Canola mitochondrion 62.21 61.28
VIT_13s0019g02130.t01 Wine grape peroxisome 62.6 61.19
VIT_13s0019g02140.t01 Wine grape peroxisome 62.98 60.89
CDY40186 Canola cytosol 48.09 60.87
CDY64214 Canola mitochondrion 39.69 60.82
CDX95753 Canola cytosol, peroxisome, plastid 60.69 60.69
CDX97899 Canola peroxisome 60.69 60.69
CDY45432 Canola cytosol 60.69 60.69
Os03t0269000-01 Rice plastid 49.24 60.56
CDY45441 Canola cytosol 51.53 60.27
CDY40165 Canola plastid 59.92 59.92
CDY40182 Canola cytosol, peroxisome, plastid 59.92 59.92
CDY45435 Canola cytosol, peroxisome, plastid 59.92 59.92
CDY45438 Canola cytosol 59.92 59.92
CDX95750 Canola cytosol 62.6 59.85
CDY40179 Canola cytosol, peroxisome, plastid 59.54 59.77
CDX97893 Canola mitochondrion 61.45 59.41
CDY09823 Canola peroxisome 61.45 59.41
CDY09824 Canola mitochondrion 61.45 59.41
CDX97897 Canola cytosol, extracellular 52.29 59.31
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 59.16 58.94
CDY31776 Canola cytosol, peroxisome, plastid 60.69 58.67
KRG97870 Soybean mitochondrion 55.73 58.4
CDY51372 Canola plastid 61.83 58.06
CDY40185 Canola plastid 58.02 58.02
CDX97895 Canola cytosol 51.53 57.45
CDY31774 Canola cytosol 51.53 57.45
CDY40171 Canola cytosol 47.71 56.56
EES08074 Sorghum plastid 64.5 56.15
KRG97857 Soybean mitochondrion 53.44 56.0
TraesCS4D01G210700.1 Wheat plastid 67.56 55.84
OQU92858 Sorghum cytosol, peroxisome, plastid 65.27 55.52
CDY16436 Canola endoplasmic reticulum, vacuole 22.14 55.24
CDY45433 Canola cytosol 51.53 55.1
VIT_13s0019g02170.t01 Wine grape mitochondrion, nucleus, peroxisome, plastid 59.92 55.09
Os03t0269100-02 Rice mitochondrion, plastid 64.5 54.87
KRH31021 Soybean mitochondrion 63.36 54.79
CDY31770 Canola plastid 46.56 52.59
CDY35991 Canola plastid 24.81 52.42
CDY72061 Canola cytosol 21.76 52.29
CDX95752 Canola cytosol 46.56 51.26
HORVU4Hr1G060330.1 Barley mitochondrion 62.6 51.25
CDY40177 Canola cytosol 51.91 49.1
CDX97890 Canola cytosol 61.45 47.49
OQU91956 Sorghum extracellular, peroxisome 50.76 41.56
CDY65683 Canola cytosol, mitochondrion 62.6 41.1
CDY35231 Canola peroxisome 17.18 36.29
CDY16690 Canola peroxisome 33.21 34.12
CDX94534 Canola peroxisome 32.44 33.33
CDY27447 Canola cytosol, mitochondrion, peroxisome 32.06 32.56
CDX76382 Canola cytosol, mitochondrion, peroxisome 31.68 32.3
CDY31767 Canola plastid 66.41 30.91
CDY43488 Canola cytosol 29.77 26.99
CDY27781 Canola cytosol, peroxisome, plastid 29.39 26.64
CDY17559 Canola cytoskeleton, nucleus, peroxisome 28.63 26.13
CDY05152 Canola cytosol 22.14 24.27
CDX73802 Canola peroxisome 26.72 23.49
CDY08402 Canola cytosol 26.34 23.47
CDY00799 Canola peroxisome 26.34 23.15
CDY50145 Canola plastid 62.6 22.65
CDY05153 Canola cytosol, nucleus, plastid 5.73 21.43
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1GO:A0A078EDK9EnsemblPlants:CDX98899ProteinID:CDX98899ProteinID:CDX98899.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491EnsemblPlantsGene:GSBRNA2T00107004001
InterPro:NAD(P)-bd_dom_sfPFAM:PF13561PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061PANTHER:PTHR42898
PANTHER:PTHR42898:SF3InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CSUniParc:UPI0004EEB655SEG:seg
Description
BnaC09g49360D
Coordinates
chrLK031907:-:485144..487176
Molecular Weight (calculated)
28013.5 Da
IEP (calculated)
7.341
GRAVY (calculated)
0.060
Length
262 amino acids
Sequence
(BLAST)
001: MESDRRWSLA GKAALVTGGT RGIGRAIVEE LARLGAKVHT CSRNQEELKA CLDDWKSNGL VVSGSVCDAS DRDQREKLIQ EVSSAFSGKL NILVNNVGTS
101: VRKPTVEYTS EDYAKIMSTN LESAFHISQI AHPLLKASGV GSIVFISSVA GLVRLSTASI YGATKGALNQ LTRNLACEWA GDNIRTNSVA PWYIKTSLVE
201: PLLEKKGFVD AVVDRTPLGR VGEPEEVASL VAFLCLPAAS YITGQVIAVD GGFTVNGFSY VM
Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.