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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:
  • cytosol 2
  • plastid 3
  • peroxisome 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:cytosol
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0004g05310.t01
VIT_06s0004g05320.t01
VIT_06s0004g05330.t01
VIT_06s0004g05360.t01
VIT_06s0004g05370.t01
VIT_06s0004g05380.t01
VIT_06s0004g05390.t01
VIT_06s0004g05400.t01
VIT_06s0004g05430.t01
VIT_06s0004g05440.t01
VIT_06s0004g05450.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G06060.1 VIT_06s0004g05310.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05320.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05330.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05360.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05370.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05380.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05390.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05400.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05430.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05440.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05450.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05310.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05320.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05330.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05360.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05370.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05380.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05390.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05400.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05430.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05440.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05450.t01 AT2G29360.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0019g02170.t01 Wine grape mitochondrion, nucleus, peroxisome, plastid 79.1 74.39
VIT_13s0019g02130.t01 Wine grape peroxisome 72.76 72.76
GSMUA_Achr10P... Banana cytosol 73.13 72.32
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 67.54 71.83
Solyc03g096640.2.1 Tomato mitochondrion, plastid 71.64 71.64
PGSC0003DMT400043159 Potato mitochondrion 71.64 71.38
CDX98899 Canola peroxisome 69.78 71.37
CDY04977 Canola peroxisome 69.78 71.1
CDY04975 Canola mitochondrion 29.48 70.54
VIT_06s0004g05370.t01 Wine grape peroxisome 66.04 70.24
AT5G06060.1 Thale cress peroxisome 69.03 70.08
CDY14094 Canola peroxisome 68.66 69.96
Bra028744.1-P Field mustard cytosol 68.66 69.96
VIT_06s0004g05380.t01 Wine grape plastid 70.15 69.63
VIT_06s0004g05440.t01 Wine grape cytosol 21.27 69.51
HORVU4Hr1G060350.3 Barley plastid 70.52 69.49
VIT_13s0019g02140.t01 Wine grape peroxisome 70.15 69.37
VIT_06s0004g05400.t01 Wine grape cytosol 28.73 69.37
KRG97856 Soybean mitochondrion, plastid 69.78 68.75
TraesCS4A01G094500.1 Wheat cytosol, peroxisome, plastid 69.03 68.27
VIT_06s0004g05280.t01 Wine grape cytosol, nucleus, peroxisome 64.18 68.25
TraesCS4A01G094400.1 Wheat plastid 69.03 68.01
CDX70101 Canola peroxisome 66.42 67.94
TraesCS4B01G209900.1 Wheat peroxisome 68.28 67.78
TraesCS4D01G210800.1 Wheat plastid 68.66 67.65
TraesCS4B01G210000.1 Wheat plastid 68.66 67.65
Bra009159.1-P Field mustard cytosol, mitochondrion, peroxisome, plasma membrane 66.04 67.56
KRH31007 Soybean mitochondrion 68.28 67.53
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 67.91 67.41
KRH31026 Soybean cytosol, mitochondrion, peroxisome, plastid 68.28 67.28
VIT_06s0004g05310.t01 Wine grape cytosol 28.36 67.26
KRH31025 Soybean plastid 69.4 67.15
Os03t0268900-02 Rice plastid 67.54 67.04
Zm00001d028575_P001 Maize extracellular 67.54 66.3
VIT_06s0004g05330.t01 Wine grape peroxisome 61.94 65.35
VIT_08s0007g00890.t01 Wine grape peroxisome 60.82 65.2
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 57.84 64.58
Os03t0269000-01 Rice plastid 51.12 64.32
VIT_08s0007g00900.t01 Wine grape mitochondrion, plastid 62.31 63.74
VIT_08s0007g00920.t01 Wine grape peroxisome 63.06 63.3
PGSC0003DMT400043152 Potato peroxisome 65.3 63.18
Solyc03g096660.1.1 Tomato extracellular 45.15 62.05
KRG97870 Soybean mitochondrion 57.09 61.2
KRG97857 Soybean mitochondrion 55.22 59.2
Os03t0269100-02 Rice mitochondrion, plastid 67.91 59.09
KRH31021 Soybean mitochondrion 66.79 59.08
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 53.73 58.54
EES08074 Sorghum plastid 65.67 58.47
TraesCS4D01G210700.1 Wheat plastid 69.03 58.36
VIT_06s0004g05450.t01 Wine grape plasma membrane 38.81 57.78
OQU92858 Sorghum cytosol, peroxisome, plastid 65.67 57.14
HORVU4Hr1G060330.1 Barley mitochondrion 64.93 54.38
CDX98898 Canola cytosol, peroxisome, plasma membrane 61.57 53.23
OQU91956 Sorghum extracellular, peroxisome 51.87 43.44
VIT_01s0011g01520.t01 Wine grape peroxisome 26.49 23.91
VIT_19s0085g00500.t01 Wine grape peroxisome 26.49 23.91
VIT_17s0000g08740.t01 Wine grape cytosol 10.82 23.58
VIT_14s0128g00340.t01 Wine grape plastid 29.1 22.87
VIT_00s0516g00030.t01 Wine grape cytosol, peroxisome 26.87 7.0
Protein Annotations
EntrezGene:100259789wikigene:100259789EntrezGene:100265103wikigene:100265103Gene3D:3.40.50.720MapMan:50.1.1
ProteinID:CBI31629ProteinID:CBI31629.3UniProt:D7TLP2EMBL:FN595998GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491
GO:GO:0055114EntrezGene:LOC100259789wikigene:LOC100259789EntrezGene:LOC100265103wikigene:LOC100265103InterPro:NAD(P)-bd_dom_sf
PFAM:PF13561PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061PANTHER:PTHR42898PANTHER:PTHR42898:SF3
InterPro:SDR_famSMART:SM00822SUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CSTIGR:TC58159TIGR:TC67368
UniParc:UPI00015C9758ArrayExpress:VIT_13s0019g02180EnsemblPlantsGene:VIT_13s0019g02180EnsemblPlants:VIT_13s0019g02180.t01RefSeq:XP_002282755RefSeq:XP_002282755.1
Description
No Description!
Coordinates
chr13:+:3468041..3471865
Molecular Weight (calculated)
28515.1 Da
IEP (calculated)
8.048
GRAVY (calculated)
0.084
Length
268 amino acids
Sequence
(BLAST)
001: MAESNGSFGG SGWSLRGTTA LVTGGTRGIG YAVVEELAGL GATVHTCSRN EAELDKCLRE WHAKGFSVTA SICDGSDRAQ REKLMEKVSS IFNGKLNILV
101: NNVGTSFRKP TVDYTAAEYS TIMTTNLESA YHLCQLAHPL LKASGAGSIV FVSSVAGVVS LGTGSIYAAT KAAINQLTKN FACEWAKDNI RSNSVAPWYI
201: KTSLVEHLLQ KKDFFEGIVS RTPLGRPGEP KEVASLVAFL CLPVASYITG QVICVDGGMT VNGFYPTI
Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.