CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028575_P001	Maize	extracellular	79.87	90.11
HORVU4Hr1G060350.3	Barley	plastid	73.38	83.09
TraesCS4A01G094400.1	Wheat	plastid	73.05	82.72
TraesCS4D01G210800.1	Wheat	plastid	72.73	82.35
TraesCS4B01G210000.1	Wheat	plastid	72.4	81.99
Os03t0269000-01	Rice	plastid	54.87	79.34
AT5G06060.1	Thale cress	peroxisome	57.79	67.42
GSMUA_Achr10P...	Banana	cytosol	59.09	67.16
Bra028744.1-P	Field mustard	cytosol	56.17	65.78
CDY14094	Canola	peroxisome	56.17	65.78
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	57.14	65.67
CDY04977	Canola	peroxisome	55.84	65.4
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	56.82	65.3
CDX98899	Canola	peroxisome	55.52	65.27
PGSC0003DMT400043159	Potato	mitochondrion	56.17	64.31
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	53.9	63.36
CDX70101	Canola	peroxisome	53.9	63.36
KRH31007	Soybean	mitochondrion	53.9	61.25
VIT_13s0019g02140.t01	Wine grape	peroxisome	53.57	60.89
CDY04975	Canola	mitochondrion	21.75	59.82
VIT_13s0019g02130.t01	Wine grape	peroxisome	51.95	59.7
EES08074	Sorghum	plastid	58.12	59.47
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	51.62	58.46
KRG97870	Soybean	mitochondrion	47.08	58.0
KRH31025	Soybean	plastid	51.95	57.76
KRG97856	Soybean	mitochondrion, plastid	50.97	57.72
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	51.62	55.79
PGSC0003DMT400043152	Potato	peroxisome	48.7	54.15
KRG97857	Soybean	mitochondrion	43.51	53.6
Solyc03g096660.1.1	Tomato	extracellular	33.77	53.33
EES10199	Sorghum	mitochondrion	44.48	51.5
KXG29038	Sorghum	mitochondrion, plastid	43.18	50.38
KRH31021	Soybean	mitochondrion	49.35	50.16
CDX98898	Canola	cytosol, peroxisome, plasma membrane	50.0	49.68
EES10195	Sorghum	mitochondrion	42.53	49.62
EES10198	Sorghum	mitochondrion, plastid	42.53	48.34
OQU91956	Sorghum	extracellular, peroxisome	49.35	47.5
KXG34055	Sorghum	plastid	41.88	46.57
KXG29040	Sorghum	cytosol, peroxisome, plastid	35.71	45.45
OQU84126	Sorghum	peroxisome	39.94	43.31
EES19901	Sorghum	peroxisome	28.9	35.18
EER98384	Sorghum	peroxisome	28.25	34.39
EES11416	Sorghum	mitochondrion, peroxisome, plastid	24.68	25.59
EES11417	Sorghum	peroxisome	24.35	25.25
OQU77380	Sorghum	mitochondrion	25.97	24.46

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1Z5SAC9	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU92858	ProteinID:OQU92858	ProteinID:OQU92858.1	PFAM:PF13561
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF14	InterPro:SDR_fam
EnsemblPlantsGene:SORBI_3001G424300	SUPFAM:SSF51735	unigene:Sbi.8037	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI000B423F4D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:70438453..70441833

Molecular Weight (calculated)

33561.8 Da

IEP (calculated)

9.260

GRAVY (calculated)

0.036

Length

308 amino acids

Sequence
(BLAST)

001: MAAAETSGTA IGTSGRWALH GKTALVTGGT RGIGRAVVEE LAALGAAVHT CSRKAEELGE RIKEWEARGF RVTGSVCDLS ERDQRERLLR EVGNRFGGKL
101: NILVNNVGTN IRKPTTEFTA EEYSFVMATN LESAYHLCQI AHPLLKLSGS GSIIFISSVC GMVGVFSGTI YAMTKGAINQ LTKNIACEWA KDNIRANSVA
201: PWYITTSLTE RLLANKDFEE QVVSRTPLGR VGEPEEISAL VAFLCMPGST YITGQTIAVD GEKVRLIVAY KLKRFLEVGG KKANKMYVKV SLCWILFITC
301: LRNSVRAM

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.