CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29038	Sorghum	mitochondrion, plastid	92.8	92.8
TraesCS3B01G434900.1	Wheat	cytosol, mitochondrion, plastid	25.76	77.27
TraesCS1A01G383700.1	Wheat	cytosol, extracellular, plastid	42.05	73.03
TraesCS1B01G419000.1	Wheat	mitochondrion, plastid	50.0	72.53
EES10199	Sorghum	mitochondrion	72.35	71.8
TraesCS3A01G401900.1	Wheat	extracellular, mitochondrion, plastid	71.21	71.48
TraesCS3D01G396800.1	Wheat	extracellular, mitochondrion, plastid	70.83	71.1
KXG29040	Sorghum	cytosol, peroxisome, plastid	65.15	71.07
Zm00001d048726_P001	Maize	cytosol	59.47	70.09
HORVU1Hr1G084560.2	Barley	extracellular, mitochondrion, plastid	69.7	69.96
TraesCS3D01G396900.1	Wheat	mitochondrion, plastid	69.7	69.96
TraesCS1A01G390900.1	Wheat	mitochondrion, plastid	68.18	69.5
TraesCS3A01G402000.1	Wheat	mitochondrion, plastid	68.56	68.82
TraesCS5A01G029700.1	Wheat	plastid	68.56	68.82
TraesCS1B01G418900.1	Wheat	mitochondrion	67.8	68.58
TraesCS5D01G530100.1	Wheat	peroxisome	67.42	68.46
TraesCS4D01G309300.1	Wheat	cytosol, peroxisome, plastid	68.18	68.44
TraesCS5B01G531800.1	Wheat	cytosol, peroxisome, plastid	65.91	68.24
TraesCS1D01G398800.1	Wheat	mitochondrion	67.42	68.2
TraesCS5B01G028300.1	Wheat	plastid	67.8	68.06
EES10198	Sorghum	mitochondrion, plastid	69.7	67.9
TraesCS5D01G545800.1	Wheat	cytosol, mitochondrion, plastid	67.8	67.8
TraesCS5D01G037500.1	Wheat	plastid	67.42	67.68
HORVU1Hr1G086190.1	Barley	peroxisome	49.62	67.53
TraesCS5D01G316400.1	Wheat	cytosol, peroxisome, plastid	66.67	67.43
TraesCS5B01G531600.1	Wheat	mitochondrion	66.29	67.31
TraesCS2D01G497300.1	Wheat	cytosol, peroxisome, plastid	67.05	67.3
TraesCS2A01G497100.1	Wheat	golgi, peroxisome, plastid	67.05	67.3
TraesCS4A01G328000.1	Wheat	cytosol, peroxisome, plastid	66.67	66.92
HORVU1Hr1G086200.3	Barley	peroxisome, plastid	67.8	66.79
TraesCS5B01G310100.1	Wheat	peroxisome	65.91	66.67
TraesCS3B01G435100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	70.08	66.31
TraesCS5B01G542200.1	Wheat	cytosol, peroxisome, plastid	65.91	66.16
TraesCS5D01G545700.1	Wheat	peroxisome	65.53	65.78
TraesCS1D01G398900.1	Wheat	peroxisome	44.32	65.36
TraesCS1A01G390800.1	Wheat	mitochondrion, plastid	68.56	64.64
TraesCS2B01G525400.1	Wheat	endoplasmic reticulum, peroxisome, plastid	65.91	64.44
TraesCS4A01G343100.1	Wheat	cytosol, peroxisome, plastid	43.56	63.19
TraesCS5B01G542100.1	Wheat	plastid	33.71	62.68
HORVU3Hr1G090170.2	Barley	mitochondrion, plastid	71.59	61.56
TraesCS1B01G410300.1	Wheat	peroxisome	70.83	61.11
HORVU5Hr1G007770.4	Barley	peroxisome	62.88	59.93
HORVU5Hr1G122860.4	Barley	nucleus, peroxisome, plastid	62.88	59.07
HORVU0Hr1G027400.1	Barley	peroxisome	44.7	58.71
KXG34055	Sorghum	plastid	59.85	57.04
TraesCS4A01G327900.1	Wheat	mitochondrion, plastid	67.8	55.59
GSMUA_Achr9P03470_001	Banana	cytosol	55.68	54.65
OQU84126	Sorghum	peroxisome	57.2	53.17
GSMUA_Achr11P...	Banana	cytosol	53.79	52.99
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	51.52	51.91
GSMUA_Achr9P03440_001	Banana	cytosol	52.27	50.92
GSMUA_Achr9P03420_001	Banana	mitochondrion	54.92	48.17
EES08074	Sorghum	plastid	53.03	46.51
GSMUA_Achr5P04560_001	Banana	cytosol	57.95	44.35
OQU92858	Sorghum	cytosol, peroxisome, plastid	49.62	42.53
CDY35991	Canola	plastid	18.94	40.32
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	23.11	37.42
GSMUA_Achr6P34030_001	Banana	cytosol	49.62	36.19
OQU91956	Sorghum	extracellular, peroxisome	42.42	35.0
EES19901	Sorghum	peroxisome	33.33	34.78
EER98384	Sorghum	peroxisome	32.95	34.39
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	54.55	30.57
EES11416	Sorghum	mitochondrion, peroxisome, plastid	29.17	25.93
GSMUA_Achr10P...	Banana	cytosol	52.65	25.79
EES11417	Sorghum	peroxisome	28.79	25.59
OQU77380	Sorghum	mitochondrion	29.17	23.55

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EntrezGene:8082051	UniProt:C5Y7C9	EnsemblPlants:EES10195	ProteinID:EES10195
ProteinID:EES10195.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061
PANTHER:PTHR42898	PANTHER:PTHR42898:SF1	InterPro:SDR_fam	SMART:SM00822	EnsemblPlantsGene:SORBI_3005G202500	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0001A86C25	RefSeq:XP_002451207.1	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:68763786..68767312

Molecular Weight (calculated)

27733.5 Da

IEP (calculated)

7.408

GRAVY (calculated)

0.169

Length

264 amino acids

Sequence
(BLAST)

001: MAASAGRRER WSLAGATALV TGGSKGIGHA IVEELAAFGA RVHTCSRNAA ELEECRRRWA EEKGLQVTVS ACDVAVRADR EALMDTVKDV FAGKLDILVN
101: NAAQVILKPA VECSGEDYAG IMATNLESCF HLSQLAHPLL RNASVAGGGS VVHISSTAGC LGVPGVVLYS IAKGGMNQLT RSLAAEWAPD KIRVNCVAPG
201: MVITDMVKNV ANSEAIKHES QRIPLRRVGE PAEVASMVSF LCMPAASYVT GQVIYVDGGR TISA

Best Arabidopsis Sequence Match ( AT2G29290.2 )
(BLAST)

001: MDKRWSLQGM NALVTGGTKG IGEAVVEELS ILGARVHTCA RDETQLQERL REWQEKGFQV TTSICDVSLR EQREKLMETV SSLFQGKLNI LVNNVGTLML
101: KPTTEYTAEE FSFLMATNLD SAFHISQLAH PLLKASGSGS IVLMSSIAGV VHVGVGSIYG ATKGAMNQLA RNLACEWASD NIRTNAICPW LITTPLISDL
201: LSVEEMKKEA EERTPMGRVG EANEVSPLVA FLCLPAASYI TGQVICVDGG LTVNGFSYQP HA

Arabidopsis Description

Tropinone reductase homolog At2g29290 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW13]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.