Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G530100.1 | Wheat | peroxisome | 95.0 | 95.0 |
| TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 93.08 | 94.9 |
| TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 62.31 | 89.01 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 78.85 | 78.54 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 78.85 | 77.95 |
| TraesCS5B01G542100.1 | Wheat | plastid | 42.31 | 77.46 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 80.0 | 77.04 |
| TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 25.38 | 75.0 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 48.08 | 68.68 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 67.69 | 67.43 |
| EES10195 | Sorghum | mitochondrion | 67.31 | 66.29 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 61.15 | 65.7 |
| EES10198 | Sorghum | mitochondrion, plastid | 68.46 | 65.68 |
| KXG29038 | Sorghum | mitochondrion, plastid | 66.15 | 65.15 |
| TraesCS5B01G028300.1 | Wheat | plastid | 65.77 | 65.02 |
| Zm00001d007687_P001 | Maize | extracellular | 64.62 | 63.88 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 66.92 | 62.37 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 67.69 | 58.28 |
| Zm00001d048726_P001 | Maize | cytosol | 48.46 | 56.25 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 58.85 | 55.84 |
| TraesCS1B01G410300.1 | Wheat | peroxisome | 65.38 | 55.56 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 58.85 | 55.43 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 54.62 | 52.79 |
| GSMUA_Achr11P... | Banana | cytosol | 54.23 | 52.61 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 53.08 | 51.11 |
| TraesCS4B01G210000.1 | Wheat | plastid | 53.08 | 50.74 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 48.85 | 48.47 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 50.0 | 47.97 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 51.54 | 44.52 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 55.0 | 41.45 |
| CDY35991 | Canola | plastid | 18.08 | 37.9 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 51.92 | 37.29 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 23.08 | 36.81 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 33.46 | 34.39 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 53.85 | 29.72 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 29.23 | 25.42 |
| GSMUA_Achr10P... | Banana | cytosol | 51.92 | 25.05 |
| TraesCS1B01G101100.1 | Wheat | plastid | 29.62 | 22.13 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G531600.1 | EnsemblPlantsGene:TraesCS5B01G531600 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SMART:SM00822 | SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:689646067..689647540
Molecular Weight (calculated)
27757.4 Da
IEP (calculated)
7.773
GRAVY (calculated)
0.018
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAERGSREG RWTLAAARAL ITGGSKGIGY AIVEELAGFG ARVHACSRNA AELEECRRRW EEKGLHVTVS ACDVSVRADR ERLMDTVRQT FNGKLDILVN
101: NAGQLLVKPT AECTAEEYSK VMATNLESSF HLCQLARPLL VHAGGGSIIN MSSIGGSIGF VGSAIYAITK SAMNQLTRSL AAEWAPNNIR VNGVAPGFIT
201: TDMIKDMDTE SLEREHSKTP LLRSGKPVEI ASAVAFLCMP AASFITGQVI CVDGGRTISA
101: NAGQLLVKPT AECTAEEYSK VMATNLESSF HLCQLARPLL VHAGGGSIIN MSSIGGSIGF VGSAIYAITK SAMNQLTRSL AAEWAPNNIR VNGVAPGFIT
201: TDMIKDMDTE SLEREHSKTP LLRSGKPVEI ASAVAFLCMP AASFITGQVI CVDGGRTISA
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.