Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G094400.1 | Wheat | plastid | 98.16 | 98.16 |
| TraesCS4D01G210800.1 | Wheat | plastid | 97.43 | 97.43 |
| HORVU4Hr1G060350.3 | Barley | plastid | 96.32 | 96.32 |
| Os03t0269000-01 | Rice | plastid | 65.07 | 83.1 |
| Zm00001d028575_P001 | Maize | extracellular | 82.72 | 82.42 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 77.57 | 78.15 |
| GSMUA_Achr10P... | Banana | cytosol | 72.43 | 72.69 |
| OQU92858 | Sorghum | cytosol, peroxisome, plastid | 81.99 | 72.4 |
| AT5G06060.1 | Thale cress | peroxisome | 67.65 | 69.7 |
| Solyc03g096640.2.1 | Tomato | mitochondrion, plastid | 68.01 | 69.03 |
| CDY14094 | Canola | peroxisome | 66.54 | 68.82 |
| CDY04977 | Canola | peroxisome | 66.54 | 68.82 |
| VIT_13s0019g02180.t01 | Wine grape | peroxisome, plasma membrane, plastid | 67.65 | 68.66 |
| Bra028744.1-P | Field mustard | cytosol | 65.81 | 68.06 |
| PGSC0003DMT400043159 | Potato | mitochondrion | 66.91 | 67.66 |
| CDX98899 | Canola | peroxisome | 63.97 | 66.41 |
| Bra009159.1-P | Field mustard | cytosol, mitochondrion, peroxisome, plasma membrane | 62.13 | 64.5 |
| CDX70101 | Canola | peroxisome | 62.13 | 64.5 |
| KRH31007 | Soybean | mitochondrion | 63.6 | 63.84 |
| CDY04975 | Canola | mitochondrion | 26.1 | 63.39 |
| VIT_13s0019g02140.t01 | Wine grape | peroxisome | 62.87 | 63.1 |
| VIT_13s0019g02130.t01 | Wine grape | peroxisome | 61.03 | 61.94 |
| KRH31025 | Soybean | plastid | 62.87 | 61.73 |
| KRG97870 | Soybean | mitochondrion | 56.25 | 61.2 |
| KRG97856 | Soybean | mitochondrion, plastid | 60.66 | 60.66 |
| KRH31026 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 59.93 | 59.93 |
| TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 18.75 | 57.95 |
| PGSC0003DMT400043152 | Potato | peroxisome | 57.72 | 56.68 |
| Solyc03g096660.1.1 | Tomato | extracellular | 40.44 | 56.41 |
| KRG97857 | Soybean | mitochondrion | 51.84 | 56.4 |
| VIT_13s0019g02170.t01 | Wine grape | mitochondrion, nucleus, peroxisome, plastid | 57.72 | 55.09 |
| TraesCS5B01G028300.1 | Wheat | plastid | 52.94 | 54.75 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 36.4 | 54.4 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 51.84 | 54.02 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 51.84 | 54.02 |
| TraesCS5B01G531600.1 | Wheat | mitochondrion | 50.74 | 53.08 |
| TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 49.63 | 52.94 |
| KRH31021 | Soybean | mitochondrion | 58.82 | 52.81 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 51.84 | 51.46 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 58.09 | 50.97 |
| TraesCS5B01G542100.1 | Wheat | plastid | 26.47 | 50.7 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 48.53 | 50.19 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 49.26 | 49.63 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 48.9 | 47.67 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 47.43 | 46.74 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 51.84 | 46.69 |
| TraesCS1B01G410300.1 | Wheat | peroxisome | 50.37 | 44.77 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 30.88 | 33.2 |
| TraesCS1B01G101100.1 | Wheat | plastid | 30.51 | 23.85 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 25.74 | 23.41 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G210000.1 | EnsemblPlantsGene:TraesCS4B01G210000 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF14 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | TMHMM:TMhelix | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:448531435..448535204
Molecular Weight (calculated)
28835.6 Da
IEP (calculated)
8.117
GRAVY (calculated)
0.032
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAGTSGSS QPGAPGRWSL HGKTALVTGG TRGIGRAVVE ELAALGAAVH TCSRKEAELG ERLKEWEARG FRVTTSVCDL SVREQRERLI GDVAERFGGK
101: LNILVNNVGT NIRKPTTEYS AEDYSFLMAT NLESAYHLCQ LAHPLLKASG LGSIVFISSV CGLVAVFSGT LYAMTKGAIN QLTKNLACEW AKDGIRTNSV
201: APWYITTSLT EGLLANKEFE ASVVSRTPLR RVGEPGEVSS LVAFLCMPGS TYITGQTISV DGGMSVNGLY PA
101: LNILVNNVGT NIRKPTTEYS AEDYSFLMAT NLESAYHLCQ LAHPLLKASG LGSIVFISSV CGLVAVFSGT LYAMTKGAIN QLTKNLACEW AKDGIRTNSV
201: APWYITTSLT EGLLANKEFE ASVVSRTPLR RVGEPGEVSS LVAFLCMPGS TYITGQTISV DGGMSVNGLY PA
001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
Arabidopsis Description
Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.