Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G531600.1 | Wheat | mitochondrion | 94.9 | 93.08 |
| TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 65.88 | 92.31 |
| TraesCS5B01G542100.1 | Wheat | plastid | 44.31 | 79.58 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 80.39 | 78.54 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 80.0 | 77.57 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 81.96 | 77.41 |
| TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 25.1 | 72.73 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 48.24 | 67.58 |
| EES10195 | Sorghum | mitochondrion | 68.24 | 65.91 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 67.45 | 65.9 |
| KXG29038 | Sorghum | mitochondrion, plastid | 67.84 | 65.53 |
| EES10198 | Sorghum | mitochondrion, plastid | 69.02 | 64.94 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 61.18 | 64.46 |
| TraesCS5B01G028300.1 | Wheat | plastid | 66.27 | 64.26 |
| Zm00001d007687_P001 | Maize | extracellular | 65.88 | 63.88 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 67.84 | 62.01 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 67.45 | 56.95 |
| TraesCS1B01G410300.1 | Wheat | peroxisome | 66.67 | 55.56 |
| Zm00001d048726_P001 | Maize | cytosol | 48.24 | 54.91 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 58.82 | 54.74 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 58.82 | 54.35 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 54.9 | 52.04 |
| GSMUA_Achr11P... | Banana | cytosol | 54.51 | 51.87 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 52.94 | 50.0 |
| TraesCS4B01G210000.1 | Wheat | plastid | 52.94 | 49.63 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 49.02 | 47.71 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 49.41 | 46.49 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 51.37 | 43.52 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 55.69 | 41.16 |
| CDY35991 | Canola | plastid | 18.82 | 38.71 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 52.55 | 37.02 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 23.53 | 36.81 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 34.51 | 34.78 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 54.12 | 29.3 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 29.02 | 24.75 |
| GSMUA_Achr10P... | Banana | cytosol | 51.76 | 24.49 |
| TraesCS1B01G101100.1 | Wheat | plastid | 29.02 | 21.26 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G531800.1 | EnsemblPlantsGene:TraesCS5B01G531800 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SMART:SM00822 | SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:689669633..689671038
Molecular Weight (calculated)
27368.9 Da
IEP (calculated)
7.426
GRAVY (calculated)
-0.061
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEGGSREE RWTLAGARAL ITGSSKGIGY AIVEELAGFG ARVHACSRNA AELEECRRRW EEKGLHVTVS VRADREKLMD TVRQTFNGKL DILVNNAGQL
101: LVKPTAECTA EEYSKVMATN LESSFHLCQL ARPLLVHAGG GSIINMSSIG GSIGFVGSAI YAITKSAMNQ LTRSLATEWA PDKIRVNGVA PGFITTDMIK
201: DMDTEYMEQE HSKTPLRRSG KPAEIASAVA FLCMPAASFI TGQVICVDGG RTISA
101: LVKPTAECTA EEYSKVMATN LESSFHLCQL ARPLLVHAGG GSIINMSSIG GSIGFVGSAI YAITKSAMNQ LTRSLATEWA PDKIRVNGVA PGFITTDMIK
201: DMDTEYMEQE HSKTPLRRSG KPAEIASAVA FLCMPAASFI TGQVICVDGG RTISA
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.