Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 75.0 | 36.26 |
| TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 96.59 | 32.32 |
| TraesCS3D01G396900.1 | Wheat | mitochondrion, plastid | 95.45 | 31.94 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 95.45 | 30.11 |
| Zm00001d048726_P001 | Maize | cytosol | 73.86 | 29.02 |
| HORVU3Hr1G090170.2 | Barley | mitochondrion, plastid | 98.86 | 28.34 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 75.0 | 27.27 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 79.55 | 26.62 |
| TraesCS1B01G410300.1 | Wheat | peroxisome | 92.05 | 26.47 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 77.27 | 26.05 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 77.27 | 26.05 |
| Zm00001d007687_P001 | Maize | extracellular | 77.27 | 25.86 |
| TraesCS5B01G028300.1 | Wheat | plastid | 77.27 | 25.86 |
| KXG29038 | Sorghum | mitochondrion, plastid | 77.27 | 25.76 |
| EES10195 | Sorghum | mitochondrion | 77.27 | 25.76 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 78.41 | 25.56 |
| EES10198 | Sorghum | mitochondrion, plastid | 78.41 | 25.46 |
| TraesCS5B01G531600.1 | Wheat | mitochondrion | 75.0 | 25.38 |
| TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 72.73 | 25.1 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 76.14 | 22.19 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 68.18 | 21.74 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 64.77 | 20.8 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 37.5 | 20.25 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 60.23 | 19.63 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 60.23 | 19.56 |
| GSMUA_Achr11P... | Banana | cytosol | 59.09 | 19.4 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 56.82 | 19.08 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 57.95 | 18.96 |
| TraesCS4B01G210000.1 | Wheat | plastid | 57.95 | 18.75 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 64.77 | 16.52 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 55.68 | 16.28 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 57.95 | 14.09 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 35.23 | 12.25 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 57.95 | 10.83 |
| GSMUA_Achr10P... | Banana | cytosol | 60.23 | 9.83 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 27.27 | 8.03 |
| TraesCS1B01G101100.1 | Wheat | plastid | 25.0 | 6.32 |
| CDY35991 | Canola | plastid | 0.0 | 0.0 |
| TraesCS5B01G542100.1 | Wheat | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G434900.1 | EnsemblPlantsGene:TraesCS3B01G434900 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF00106 | SUPFAM:SSF51735 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3B:-:673097796..673098185
Molecular Weight (calculated)
9316.2 Da
IEP (calculated)
8.087
GRAVY (calculated)
-0.139
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MAAGGMSREE RWSLAGATAL VTGGSKGIGH AIVEELAGHG ARVHTCARSA AELEECRRRW EAKGLPVTVS VCDVSLRASR EQLVETVK
001: MAKAEENLRD KCRWSLGGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR NETQLQECVR EWQAKGFEVT TSVCDVSSRD QREKLMENVA SIFQGKLNIL
101: VSLCIRA
101: VSLCIRA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G29170]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.