Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G398900.1 | Wheat | peroxisome | 63.81 | 95.53 |
| TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 91.04 | 94.21 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 63.06 | 92.86 |
| HORVU1Hr1G086190.1 | Barley | peroxisome | 58.21 | 80.41 |
| KXG29038 | Sorghum | mitochondrion, plastid | 67.16 | 68.18 |
| EES10195 | Sorghum | mitochondrion | 66.79 | 67.8 |
| HORVU1Hr1G084560.2 | Barley | extracellular, mitochondrion, plastid | 63.81 | 65.02 |
| Zm00001d007687_P001 | Maize | extracellular | 63.43 | 64.64 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 58.21 | 64.46 |
| EES10198 | Sorghum | mitochondrion, plastid | 64.93 | 64.21 |
| HORVU5Hr1G122860.4 | Barley | nucleus, peroxisome, plastid | 66.04 | 62.99 |
| HORVU5Hr1G007770.4 | Barley | peroxisome | 62.69 | 60.65 |
| HORVU3Hr1G090170.2 | Barley | mitochondrion, plastid | 67.16 | 58.63 |
| HORVU0Hr1G027400.1 | Barley | peroxisome | 43.66 | 58.21 |
| Zm00001d048726_P001 | Maize | cytosol | 47.39 | 56.7 |
| HORVU3Hr1G097180.1 | Barley | peroxisome, plastid | 57.46 | 55.6 |
| HORVU2Hr1G091780.5 | Barley | mitochondrion, plastid | 55.97 | 55.56 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 53.73 | 53.53 |
| GSMUA_Achr11P... | Banana | cytosol | 53.36 | 53.36 |
| HORVU4Hr1G060350.3 | Barley | plastid | 52.24 | 51.47 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 51.87 | 51.29 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 48.88 | 50.0 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 52.24 | 46.51 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 55.22 | 42.9 |
| CDY35991 | Canola | plastid | 19.4 | 41.94 |
| HORVU4Hr1G060330.1 | Barley | mitochondrion | 48.88 | 40.94 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 48.51 | 35.91 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 20.9 | 34.36 |
| HORVU0Hr1G012410.1 | Barley | peroxisome | 30.6 | 32.41 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 54.85 | 31.21 |
| GSMUA_Achr10P... | Banana | cytosol | 52.61 | 26.16 |
| HORVU5Hr1G049670.1 | Barley | peroxisome | 23.13 | 24.51 |
| HORVU2Hr1G098920.1 | Barley | peroxisome | 26.12 | 23.41 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 31.34 | 21.05 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | UniProt:A0A287GL51 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:HORVU1Hr1G086200 | EnsemblPlants:HORVU1Hr1G086200.3 | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF1 |
| InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI000B47CFBA | SEG:seg |
Description
No Description!
Coordinates
chrchr1H:+:536983580..536987260
Molecular Weight (calculated)
28633.2 Da
IEP (calculated)
4.794
GRAVY (calculated)
-0.009
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: GEGDMTSGRE KRWSLAGATA LVTGGSKGIG RAIVEELAGF GARVHTCSRN AAELEECRRQ WEEEKLAITV SVCDVSVRAA REELMETVRE SFEGKLDILV
101: NNAGQLVLKA ATEWTADDYS QLMETNLESS FHLSQLAHPL LIKASVLGGG SIVNISSVGG IFGYPGLALY GITKGGMNQF TRSLATEWAR DNIRVNSVAP
201: GIVATDMIKD VGVENLEPDA LEQACSRIPM GRSGKPTEVA SVVSFLCMPT ASYITGQVIC IDGGRTIY
101: NNAGQLVLKA ATEWTADDYS QLMETNLESS FHLSQLAHPL LIKASVLGGG SIVNISSVGG IFGYPGLALY GITKGGMNQF TRSLATEWAR DNIRVNSVAP
201: GIVATDMIKD VGVENLEPDA LEQACSRIPM GRSGKPTEVA SVVSFLCMPT ASYITGQVIC IDGGRTIY
001: MDKRWSLQGM NALVTGGTKG IGEAVVEELS ILGARVHTCA RDETQLQERL REWQEKGFQV TTSICDVSLR EQREKLMETV SSLFQGKLNI LVNNVGTLML
101: KPTTEYTAEE FSFLMATNLD SAFHISQLAH PLLKASGSGS IVLMSSIAGV VHVGVGSIYG ATKGAMNQLA RNLACEWASD NIRTNAICPW LITTPLISDL
201: LSVEEMKKEA EERTPMGRVG EANEVSPLVA FLCLPAASYI TGQVICVDGG LTVNGFSYQP HA
101: KPTTEYTAEE FSFLMATNLD SAFHISQLAH PLLKASGSGS IVLMSSIAGV VHVGVGSIYG ATKGAMNQLA RNLACEWASD NIRTNAICPW LITTPLISDL
201: LSVEEMKKEA EERTPMGRVG EANEVSPLVA FLCLPAASYI TGQVICVDGG LTVNGFSYQP HA
Arabidopsis Description
Tropinone reductase homolog At2g29290 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW13]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.