Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 98.55 | 98.91 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 97.45 | 97.81 |
| HORVU3Hr1G097180.1 | Barley | peroxisome, plastid | 93.09 | 92.42 |
| Os01t0930900-00 | Rice | mitochondrion | 73.45 | 71.89 |
| KXG34055 | Sorghum | plastid | 71.27 | 70.76 |
| Zm00001d011930_P001 | Maize | mitochondrion, plastid | 72.0 | 70.71 |
| Os01t0931000-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 34.18 | 61.84 |
| TraesCS3D01G396800.1 | Wheat | extracellular, mitochondrion, plastid | 57.82 | 60.46 |
| TraesCS5D01G545800.1 | Wheat | cytosol, mitochondrion, plastid | 57.45 | 59.85 |
| TraesCS4D01G134700.1 | Wheat | peroxisome | 59.27 | 59.06 |
| TraesCS5D01G530100.1 | Wheat | peroxisome | 55.64 | 58.85 |
| TraesCS1D01G398800.1 | Wheat | mitochondrion | 55.64 | 58.62 |
| TraesCS3D01G396900.1 | Wheat | mitochondrion, plastid | 56.0 | 58.56 |
| TraesCS2D01G497300.1 | Wheat | cytosol, peroxisome, plastid | 56.0 | 58.56 |
| TraesCS5D01G316400.1 | Wheat | cytosol, peroxisome, plastid | 55.27 | 58.24 |
| TraesCS1D01G398900.1 | Wheat | peroxisome | 37.82 | 58.1 |
| TraesCS4D01G309300.1 | Wheat | cytosol, peroxisome, plastid | 55.27 | 57.79 |
| TraesCS1D01G391900.1 | Wheat | mitochondrion | 19.27 | 56.99 |
| TraesCS5D01G037500.1 | Wheat | plastid | 54.18 | 56.65 |
| TraesCS2D01G366000.2 | Wheat | peroxisome | 61.82 | 55.92 |
| TraesCS5D01G545700.1 | Wheat | peroxisome | 52.36 | 54.75 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 52.0 | 53.16 |
| TraesCS4D01G210800.1 | Wheat | plastid | 52.36 | 52.94 |
| GSMUA_Achr11P... | Banana | cytosol | 48.73 | 50.0 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 48.0 | 48.71 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 45.45 | 47.71 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 50.91 | 46.51 |
| TraesCS4D01G210700.1 | Wheat | plastid | 49.82 | 43.22 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 53.45 | 42.61 |
| CDY35991 | Canola | plastid | 17.45 | 38.71 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 46.55 | 35.36 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 19.27 | 32.52 |
| TraesCS5D01G169300.1 | Wheat | peroxisome | 28.73 | 31.23 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 52.36 | 30.57 |
| TraesCS2D01G418900.1 | Wheat | peroxisome | 27.27 | 25.08 |
| GSMUA_Achr10P... | Banana | cytosol | 48.73 | 24.86 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 30.91 | 24.5 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF5 | InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| EnsemblPlantsGene:TraesCS3D01G440700 | EnsemblPlants:TraesCS3D01G440700.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:551207200..551208121
Molecular Weight (calculated)
28590.3 Da
IEP (calculated)
5.390
GRAVY (calculated)
0.189
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAASRE ERWSLAGKTA LVTGGTKGIG RAIVEELAGF GVRVHTCARS DADVQERLRG WAADADAGRL SGRVTASACD VSVRGDREAL MATARAELGG
101: KLDILVNNAG QTFFMPATQS TAEDYARLMA TNLESCFHLA QLAHPLLVAA GGGSVVNISS VAAAIAYPVL SVYSATKAAM NQLSRNLAVE WASDGIRVNC
201: VAPGGIRSDI LQSSGIEVDM EALLVMGKKE NERVALGRMG EPEEVASLVT FLCMPAASYV TGQVIYVDGG RTIAA
101: KLDILVNNAG QTFFMPATQS TAEDYARLMA TNLESCFHLA QLAHPLLVAA GGGSVVNISS VAAAIAYPVL SVYSATKAAM NQLSRNLAVE WASDGIRVNC
201: VAPGGIRSDI LQSSGIEVDM EALLVMGKKE NERVALGRMG EPEEVASLVT FLCMPAASYV TGQVIYVDGG RTIAA
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.