Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G391900.1 | Wheat | mitochondrion | 59.0 | 63.44 |
| TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 84.0 | 46.15 |
| TraesCS2A01G497100.1 | Wheat | golgi, peroxisome, plastid | 72.0 | 27.38 |
| TraesCS4A01G328000.1 | Wheat | cytosol, peroxisome, plastid | 70.0 | 26.62 |
| CDY35991 | Canola | plastid | 32.0 | 25.81 |
| TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 36.0 | 23.68 |
| TraesCS3A01G401900.1 | Wheat | extracellular, mitochondrion, plastid | 59.0 | 22.43 |
| TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 58.0 | 22.39 |
| TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 62.0 | 22.14 |
| TraesCS2A01G369400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 59.0 | 22.1 |
| TraesCS4A01G327900.1 | Wheat | mitochondrion, plastid | 70.0 | 21.74 |
| TraesCS5A01G029700.1 | Wheat | plastid | 56.0 | 21.29 |
| TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 56.0 | 21.29 |
| TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 54.0 | 19.71 |
| Os11t0443700-01 | Rice | plastid | 51.0 | 19.62 |
| TraesCS4A01G179900.1 | Wheat | peroxisome | 54.0 | 19.57 |
| Os11t0438700-02 | Rice | plastid | 50.0 | 18.94 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 47.0 | 17.47 |
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 44.0 | 16.24 |
| GSMUA_Achr11P... | Banana | cytosol | 43.0 | 16.04 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 48.0 | 15.95 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 43.0 | 15.87 |
| TraesCS4A01G094400.1 | Wheat | plastid | 43.0 | 15.81 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 25.0 | 15.34 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 40.0 | 15.27 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 48.0 | 13.91 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 45.0 | 12.43 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 31.0 | 12.25 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 31.0 | 10.37 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 47.0 | 9.98 |
| TraesCS1A01G083800.1 | Wheat | plastid | 30.0 | 8.65 |
| GSMUA_Achr10P... | Banana | cytosol | 44.0 | 8.16 |
| Os04t0269100-00 | Rice | plastid | 2.0 | 0.79 |
| Os11t0438000-02 | Rice | cytosol | 1.0 | 0.74 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G342900.1 | EnsemblPlantsGene:TraesCS4A01G342900 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00081 | SUPFAM:SSF51735 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:-:622439970..622441062
Molecular Weight (calculated)
10830.2 Da
IEP (calculated)
4.983
GRAVY (calculated)
0.169
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MNQLTRSLAT EWAPDKIRVN GVAPGFITTD MIKDVSNIVL PLFQITMDTE YLEQELAKTP LRRSGKPAEI ASAVAYLCMP AASFITGQVI CVDGGRTISA
001: MVLDMASHLY TNPPQNLHFI SSSSSLKPHL CLSFKRINPK HKSSSSSVFV PYASQSSIAI TSKERWSLNG MSALVTGGTR GIGRAIVEEL AGLGAEVHTC
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD
Arabidopsis Description
Tropinone reductase homolog At2g29260, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW12]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.