Factsheet for Os11t0438700-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0443700-01	Rice	plastid	72.35	73.46
Os11t0438000-02	Rice	cytosol	30.68	60.0
GSMUA_Achr9P03470_001	Banana	cytosol	56.44	55.39
Os11t0654400-00	Rice	mitochondrion	54.55	53.93
GSMUA_Achr11P...	Banana	cytosol	54.55	53.73
Os11t0652900-00	Rice	cytosol	42.8	53.55
TraesCS1D01G391900.1	Wheat	mitochondrion	18.56	52.69
Os01t0930900-00	Rice	mitochondrion	55.68	52.31
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	51.52	51.91
Os03t0268900-02	Rice	plastid	53.03	51.85
Os01t0931000-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.55	51.32
GSMUA_Achr9P03440_001	Banana	cytosol	52.65	51.29
Os03t0269000-01	Rice	plastid	40.53	50.23
TraesCS4A01G342900.1	Wheat	cytosol, peroxisome, plastid	18.94	50.0
GSMUA_Achr9P03420_001	Banana	mitochondrion	53.41	46.84
Os04t0269100-00	Rice	plastid	43.18	44.88
Os03t0269100-02	Rice	mitochondrion, plastid	49.24	42.21
GSMUA_Achr5P04560_001	Banana	cytosol	54.55	41.74
CDY35991	Canola	plastid	19.32	41.13
GSMUA_Achr6P34030_001	Banana	cytosol	53.03	38.67
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	23.86	38.65
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	55.3	31.0
Os09t0133200-01	Rice	peroxisome	29.55	30.83
Os04t0614000-01	Rice	cytosol	31.44	27.76
GSMUA_Achr10P...	Banana	cytosol	54.55	26.72
Os05t0140800-01	Rice	plastid	29.55	21.37

Protein Annotations

Gene3D:3.40.50.720	EntrezGene:4350416	MapMan:50.1.1	ProteinID:ABA93289.1	ProteinID:ABG22470.1	EMBL:AK063434
ProteinID:BAF28172.1	ProteinID:BAT13860.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os11g0438700	EnsemblPlants:Os11t0438700-02	PFAM:PF13561
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	UniProt:Q2R5F6
InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI000068238E	RefSeq:XP_015616942.1
SEG:seg	:	:	:	:	:

Description

Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-01);Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-02);Hypothetical conserved gene. (Os11t0438700-03)

Coordinates

chr11:+:14330653..14336130

Molecular Weight (calculated)

27744.6 Da

IEP (calculated)

6.480

GRAVY (calculated)

0.256

Length

264 amino acids

Sequence
(BLAST)

001: MAMATTSSKN ERWSLAGATA LVTGGSKGIG RAIVEELASL GATVHTCART EAPLNRCREE LTAKGLAVTV SVCDVSLRAD REALAGTVRE LFGGKLSILV
101: NCAGMSFLKP AVELTPDDCS QVMGMNFESC FHLSQLAYPL LKASQRGCII NISSIASVVA FCSLPNAVYS AAKGAMNQVT RNLAAEWAND GIRVNCVAPG
201: FIRTPLLSEF VEGNELGRAE FSRVPMGRLG EPEDIASLVA FLSMPASSYI TGQVICADGG RCLS

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.