Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G02050.1 | KRH10294 | AT3G46090.1 | 17259181 |
| AT2G02050.1 | KRH23029 | AT3G46090.1 | 17259181 |
| AT2G02050.1 | KRH24840 | AT3G46090.1 | 17259181 |
| AT2G02050.1 | KRH29844 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90692 | Soybean | mitochondrion | 73.08 | 58.16 |
| VIT_01s0137g00010.t01 | Wine grape | cytosol | 70.51 | 55.0 |
| Solyc04g008490.1.1 | Tomato | cytosol | 66.67 | 52.0 |
| Bra024837.1-P | Field mustard | cytosol | 65.38 | 50.0 |
| CDY17445 | Canola | cytosol | 65.38 | 50.0 |
| CDY17618 | Canola | cytosol | 65.38 | 50.0 |
| CDY03083 | Canola | cytosol | 64.1 | 49.02 |
| Bra026619.1-P | Field mustard | cytosol | 55.13 | 47.78 |
| AT2G02050.1 | Thale cress | cytosol | 62.82 | 47.57 |
| CDY09393 | Canola | cytosol | 56.41 | 47.31 |
| EER92927 | Sorghum | cytosol | 58.97 | 42.59 |
| Zm00001d027493_P001 | Maize | mitochondrion | 58.97 | 42.59 |
| HORVU4Hr1G082570.1 | Barley | mitochondrion | 60.26 | 42.34 |
| TraesCS5A01G496200.1 | Wheat | mitochondrion | 58.97 | 41.44 |
| TraesCS4B01G323800.1 | Wheat | cytosol | 58.97 | 41.44 |
| TraesCS4D01G320600.1 | Wheat | mitochondrion | 58.97 | 41.44 |
| Bra017426.1-P | Field mustard | cytosol | 62.82 | 35.77 |
| CDY15810 | Canola | cytosol, nucleus, plastid | 34.62 | 29.67 |
| Os03t0129900-01 | Rice | mitochondrion | 55.13 | 29.25 |
| GSMUA_Achr4P29690_001 | Banana | cytosol | 25.64 | 16.81 |
Protein Annotations
| EMBL:ACUP02008778 | EnsemblPlants:KRH16100 | EnsemblPlantsGene:GLYMA_14G132200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003954 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_B18_su | PFAM:PF05676 | ProteinID:KRH16100 |
| ProteinID:KRH16100.1 | UniParc:UPI000296AB66 | UniProt:K7M6J1 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr14:+:22632092..22632391
Molecular Weight (calculated)
9309.4 Da
IEP (calculated)
6.242
GRAVY (calculated)
-0.805
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MKVEGSSEKM IVTQQEEMVE ARPEFYLPWK CENECHSYEK CEYELVMEKM LQMQKIHQHQ QKSNPKQLLI PLPKLANA
001: MEVPGSSKKM IATQEEMSAA KIALGSRDMC AHLLIPLNKC RQAEFYLPWK CEDERHVYEK CEYELVMERM LAMKKIREEE ALAKQNKLQG NAAVPLIPKT
101: ANA
101: ANA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.