Factsheet for Os03t0129900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G323800.1	Wheat	cytosol	65.99	87.39
TraesCS5A01G496200.1	Wheat	mitochondrion	65.31	86.49
TraesCS4D01G320600.1	Wheat	mitochondrion	65.31	86.49
EER92927	Sorghum	cytosol	63.27	86.11
Zm00001d027493_P001	Maize	mitochondrion	62.59	85.19
HORVU4Hr1G082570.1	Barley	mitochondrion	63.95	84.68
Bra026619.1-P	Field mustard	cytosol	43.54	71.11
CDY09393	Canola	cytosol	43.54	68.82
Solyc04g008490.1.1	Tomato	cytosol	46.26	68.0
CDY03083	Canola	cytosol	46.26	66.67
CDY17445	Canola	cytosol	46.26	66.67
KRG90692	Soybean	mitochondrion	44.22	66.33
VIT_01s0137g00010.t01	Wine grape	cytosol	44.9	66.0
CDY17618	Canola	cytosol	45.58	65.69
Bra024837.1-P	Field mustard	cytosol	45.58	65.69
AT2G02050.1	Thale cress	cytosol	44.22	63.11
KRH16100	Soybean	cytosol	29.25	55.13
Bra017426.1-P	Field mustard	cytosol	47.62	51.09
CDY15810	Canola	cytosol, nucleus, plastid	29.25	47.25
GSMUA_Achr4P29690_001	Banana	cytosol	27.89	34.45

Protein Annotations

MapMan:2.4.1.4.2.3	ProteinID:BAF10765.1	ProteinID:BAS82120.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003954
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0031966	GO:GO:0045271
GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase_B18_su	EnsemblPlantsGene:Os03g0129900	EnsemblPlants:Os03t0129900-01	PFAM:PF05676	PFscan:PS51808
PANTHER:PTHR20900	UniProt:Q0DVH3	UniParc:UPI0000E11EF2	SEG:seg	:	:

Description

NADH-ubiquinone oxidoreductase B18 subunit family protein. (Os03t0129900-01)

Coordinates

chr3:-:1685564..1689540

Molecular Weight (calculated)

16699.1 Da

IEP (calculated)

9.921

GRAVY (calculated)

-0.846

Length

147 amino acids

Sequence
(BLAST)

001: SWSPNPSPKR PIQPPASTHR TTNHRPPRRR GERKEEREME AAAAAGVQLG TSKPQIATQA EMSEARLPLP YRDQCAHLLI PLNKCRVAEY YLPWKCEPER
101: HAYEKCQYEL VMERMIQMQK IREAQEAKSK GAATIGVPLI PSTAKLS

Best Arabidopsis Sequence Match ( AT2G02050.1 )
(BLAST)

001: MEVPGSSKKM IATQEEMSAA KIALGSRDMC AHLLIPLNKC RQAEFYLPWK CEDERHVYEK CEYELVMERM LAMKKIREEE ALAKQNKLQG NAAVPLIPKT
101: ANA

Arabidopsis Description

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.