Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026619.1-P | Field mustard | cytosol | 33.61 | 44.44 |
| CDY09393 | Canola | cytosol | 33.61 | 43.01 |
| VIT_01s0137g00010.t01 | Wine grape | cytosol | 34.45 | 41.0 |
| Solyc04g008490.1.1 | Tomato | cytosol | 34.45 | 41.0 |
| EER92927 | Sorghum | cytosol | 36.97 | 40.74 |
| CDY03083 | Canola | cytosol | 34.45 | 40.2 |
| CDY17445 | Canola | cytosol | 34.45 | 40.2 |
| Zm00001d027493_P001 | Maize | mitochondrion | 36.13 | 39.81 |
| Bra024837.1-P | Field mustard | cytosol | 33.61 | 39.22 |
| CDY17618 | Canola | cytosol | 33.61 | 39.22 |
| TraesCS5A01G496200.1 | Wheat | mitochondrion | 34.45 | 36.94 |
| TraesCS4D01G320600.1 | Wheat | mitochondrion | 34.45 | 36.94 |
| TraesCS4B01G323800.1 | Wheat | cytosol | 34.45 | 36.94 |
| KRG90692 | Soybean | mitochondrion | 30.25 | 36.73 |
| HORVU4Hr1G082570.1 | Barley | mitochondrion | 33.61 | 36.04 |
| AT2G02050.1 | Thale cress | cytosol | 31.09 | 35.92 |
| CDY15810 | Canola | cytosol, nucleus, plastid | 26.05 | 34.07 |
| Bra017426.1-P | Field mustard | cytosol | 33.61 | 29.2 |
| Os03t0129900-01 | Rice | mitochondrion | 34.45 | 27.89 |
| KRH16100 | Soybean | cytosol | 16.81 | 25.64 |
Protein Annotations
| MapMan:2.4.1.4.2.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003954 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0008137 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031966 | GO:GO:0045271 | GO:GO:0055114 |
| EnsemblPlantsGene:GSMUA_Achr4G29690_001 | EnsemblPlants:GSMUA_Achr4P29690_001 | EnsemblPlants:GSMUA_Achr4T29690_001 | UniProt:M0ST81 | InterPro:NADH_UbQ_OxRdtase_B18_su | PFAM:PF05676 |
| PFscan:PS51808 | PANTHER:PTHR20900 | TMHMM:TMhelix | UniParc:UPI000296A2A1 | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G29690_001]
Coordinates
chr4:+:27556347..27560197
Molecular Weight (calculated)
13730.9 Da
IEP (calculated)
8.595
GRAVY (calculated)
-0.145
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDNRVPISY RDQCAHLLIP LNKCRSAEFF LPWKCEAERH TYEKCESRAP PQASRSSPPP PTPDPLLRSP FPFLMEIRIH KKDSCRQRPR TEVVFVSPNC
101: VGLVLTLSCF LILCIFILS
101: VGLVLTLSCF LILCIFILS
001: MEVPGSSKKM IATQEEMSAA KIALGSRDMC AHLLIPLNKC RQAEFYLPWK CEDERHVYEK CEYELVMERM LAMKKIREEE ALAKQNKLQG NAAVPLIPKT
101: ANA
101: ANA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.