Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09393 | Canola | cytosol | 90.2 | 98.92 |
| CDY03083 | Canola | cytosol | 98.04 | 98.04 |
| CDY17618 | Canola | cytosol | 98.04 | 98.04 |
| AT2G02050.1 | Thale cress | cytosol | 90.2 | 89.32 |
| VIT_01s0137g00010.t01 | Wine grape | cytosol | 85.29 | 87.0 |
| Solyc04g008490.1.1 | Tomato | cytosol | 83.33 | 85.0 |
| KRG90692 | Soybean | mitochondrion | 71.57 | 74.49 |
| Bra017426.1-P | Field mustard | cytosol | 97.06 | 72.26 |
| KRH16100 | Soybean | cytosol | 50.0 | 65.38 |
| EER92927 | Sorghum | cytosol | 67.65 | 63.89 |
| Zm00001d027493_P001 | Maize | mitochondrion | 67.65 | 63.89 |
| TraesCS4B01G323800.1 | Wheat | cytosol | 67.65 | 62.16 |
| TraesCS4D01G320600.1 | Wheat | mitochondrion | 67.65 | 62.16 |
| TraesCS5A01G496200.1 | Wheat | mitochondrion | 67.65 | 62.16 |
| CDY15810 | Canola | cytosol, nucleus, plastid | 54.9 | 61.54 |
| HORVU4Hr1G082570.1 | Barley | mitochondrion | 66.67 | 61.26 |
| Os03t0129900-01 | Rice | mitochondrion | 66.67 | 46.26 |
| GSMUA_Achr4P29690_001 | Banana | cytosol | 40.2 | 34.45 |
Protein Annotations
| MapMan:2.4.1.4.2.3 | GO:A0A078FSD9 | UniProt:A0A078FSD9 | EnsemblPlants:CDY17445 | ProteinID:CDY17445 | ProteinID:CDY17445.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003954 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00095595001 | InterPro:NADH_UbQ_OxRdtase_B18_su | PFAM:PF05676 | PFscan:PS51808 | PANTHER:PTHR20900 | UniParc:UPI0001F202FB |
Description
BnaC09g20920DBnaC09g20920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSD9]
Coordinates
chrLK032073:-:405750..406646
Molecular Weight (calculated)
11751.4 Da
IEP (calculated)
7.937
GRAVY (calculated)
-0.548
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVPGSSKKM IATQEEMVAA KVPLGYRDQC AHLLIPLNKC RQAEFFLPWK CEDERHVYEK CEYELVMERM LAMQKIREEE AKAKQNKLQG NGVPLIPKTA
101: NA
101: NA
001: MEVPGSSKKM IATQEEMSAA KIALGSRDMC AHLLIPLNKC RQAEFYLPWK CEDERHVYEK CEYELVMERM LAMKKIREEE ALAKQNKLQG NAAVPLIPKT
101: ANA
101: ANA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.