Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17445 | Canola | cytosol | 98.04 | 98.04 |
| CDY17618 | Canola | cytosol | 97.06 | 97.06 |
| CDY09393 | Canola | cytosol | 88.24 | 96.77 |
| VIT_01s0137g00010.t01 | Wine grape | cytosol | 86.27 | 88.0 |
| Solyc04g008490.1.1 | Tomato | cytosol | 83.33 | 85.0 |
| KRG90692 | Soybean | mitochondrion | 71.57 | 74.49 |
| KRH16100 | Soybean | cytosol | 49.02 | 64.1 |
| EER92927 | Sorghum | cytosol | 67.65 | 63.89 |
| Zm00001d027493_P001 | Maize | mitochondrion | 67.65 | 63.89 |
| TraesCS4B01G323800.1 | Wheat | cytosol | 67.65 | 62.16 |
| TraesCS4D01G320600.1 | Wheat | mitochondrion | 67.65 | 62.16 |
| TraesCS5A01G496200.1 | Wheat | mitochondrion | 67.65 | 62.16 |
| CDY15810 | Canola | cytosol, nucleus, plastid | 54.9 | 61.54 |
| HORVU4Hr1G082570.1 | Barley | mitochondrion | 66.67 | 61.26 |
| Os03t0129900-01 | Rice | mitochondrion | 66.67 | 46.26 |
| GSMUA_Achr4P29690_001 | Banana | cytosol | 40.2 | 34.45 |
Protein Annotations
| EnsemblPlants:CDY03083 | EnsemblPlantsGene:GSBRNA2T00115427001 | GO:A0A078EU35 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003954 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008137 |
| InterPro:NADH_UbQ_OxRdtase_B18_su | PANTHER:PTHR20900 | PFAM:PF05676 | PFscan:PS51808 | ProteinID:CDY03083 | ProteinID:CDY03083.1 |
| SEG:seg | UniParc:UPI0004EF0BB4 | MapMan:2.4.1.4.2.3 | : | : | : |
Description
BnaC07g21440D
Coordinates
chrLK031939:-:908028..908414
Molecular Weight (calculated)
11767.4 Da
IEP (calculated)
7.936
GRAVY (calculated)
-0.624
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVPGSSKKM IATQEEMVAA KVPLGYRDQC AHLLIPLNKC RQAEFFLPWK CEDERHVYEK CEYELVMERM LAMQKIREEE AKAKQDKKQG NGVPLIPKTA
101: NA
101: NA
001: MEVPGSSKKM IATQEEMSAA KIALGSRDMC AHLLIPLNKC RQAEFYLPWK CEDERHVYEK CEYELVMERM LAMKKIREEE ALAKQNKLQG NAAVPLIPKT
101: ANA
101: ANA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.