Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03083 | Canola | cytosol | 61.54 | 54.9 |
| CDY17445 | Canola | cytosol | 61.54 | 54.9 |
| CDY17618 | Canola | cytosol | 60.44 | 53.92 |
| VIT_01s0137g00010.t01 | Wine grape | cytosol | 57.14 | 52.0 |
| KRG90692 | Soybean | mitochondrion | 54.95 | 51.02 |
| CDY09393 | Canola | cytosol | 51.65 | 50.54 |
| Solyc04g008490.1.1 | Tomato | cytosol | 54.95 | 50.0 |
| EER92927 | Sorghum | cytosol | 48.35 | 40.74 |
| Zm00001d027493_P001 | Maize | mitochondrion | 48.35 | 40.74 |
| HORVU4Hr1G082570.1 | Barley | mitochondrion | 45.05 | 36.94 |
| TraesCS4B01G323800.1 | Wheat | cytosol | 45.05 | 36.94 |
| TraesCS4D01G320600.1 | Wheat | mitochondrion | 45.05 | 36.94 |
| TraesCS5A01G496200.1 | Wheat | mitochondrion | 45.05 | 36.94 |
| KRH16100 | Soybean | cytosol | 29.67 | 34.62 |
| Os03t0129900-01 | Rice | mitochondrion | 47.25 | 29.25 |
| GSMUA_Achr4P29690_001 | Banana | cytosol | 34.07 | 26.05 |
Protein Annotations
| EnsemblPlants:CDY15810 | EnsemblPlantsGene:GSBRNA2T00090133001 | GO:A0A078FMY5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003954 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_B18_su | PANTHER:PTHR20900 | PFAM:PF05676 |
| ProteinID:CDY15810 | ProteinID:CDY15810.1 | UniParc:UPI0004EE88D8 | UniProt:A0A078FMY5 | MapMan:2.4.1.4.2.3 | : |
Description
BnaC02g34290DBnaC02g34290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMY5]
Coordinates
chrLK032058:+:338709..340184
Molecular Weight (calculated)
10623.8 Da
IEP (calculated)
8.330
GRAVY (calculated)
-0.763
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MTRNEESDHV RVKHIGDAKG KKEERNRDCY SRRVEVPGSS KKMIAAQEEM VAAKVPLGYR DQCAHLLIPL NKCRQAEFFL PWKCEYELVM E
001: MEVPGSSKKM IATQEEMSAA KIALGSRDMC AHLLIPLNKC RQAEFYLPWK CEDERHVYEK CEYELVMERM LAMKKIREEE ALAKQNKLQG NAAVPLIPKT
101: ANA
101: ANA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.