Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19120.1 | KRH10294 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH23029 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH24840 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH29844 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51036 | Soybean | plasma membrane, vacuole | 85.19 | 88.89 |
| KRH20901 | Soybean | vacuole | 53.01 | 56.82 |
| KRH11388 | Soybean | plasma membrane, vacuole | 50.46 | 54.09 |
| PGSC0003DMT400083215 | Potato | extracellular | 45.83 | 47.6 |
| VIT_05s0020g02720.t01 | Wine grape | extracellular, plasma membrane | 40.28 | 47.54 |
| Solyc01g080020.2.1 | Tomato | extracellular, plasma membrane | 43.98 | 45.56 |
| KRH71440 | Soybean | extracellular | 43.06 | 42.76 |
| KRH32004 | Soybean | endoplasmic reticulum | 24.54 | 37.86 |
| AT5G19120.1 | Thale cress | endoplasmic reticulum, vacuole | 33.1 | 37.05 |
| CDX88901 | Canola | extracellular | 33.1 | 36.95 |
| KRG92423 | Soybean | nucleus | 37.27 | 36.76 |
| CDX92553 | Canola | endoplasmic reticulum, vacuole | 32.18 | 36.58 |
| CDX70865 | Canola | extracellular | 33.1 | 36.57 |
| CDY13979 | Canola | endoplasmic reticulum, vacuole | 32.41 | 36.55 |
| CDY59021 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.64 | 36.43 |
| Bra002214.1-P | Field mustard | endoplasmic reticulum, extracellular | 31.94 | 36.03 |
| KRH34381 | Soybean | endoplasmic reticulum, plasma membrane | 36.81 | 35.81 |
| KRH02114 | Soybean | nucleus | 35.42 | 34.0 |
| KRH67173 | Soybean | nucleus | 33.33 | 33.72 |
| KRH11387 | Soybean | cytosol | 27.31 | 33.43 |
| KRH68584 | Soybean | nucleus | 32.41 | 32.79 |
| KRH20900 | Soybean | extracellular, vacuole | 31.71 | 31.93 |
| KRG96855 | Soybean | endoplasmic reticulum | 31.71 | 31.64 |
| KRH51876 | Soybean | nucleus | 32.18 | 31.31 |
| KRH20899 | Soybean | endoplasmic reticulum | 32.64 | 29.81 |
| KRH11386 | Soybean | endoplasmic reticulum | 28.94 | 29.69 |
| CDY72428 | Canola | extracellular | 9.03 | 29.32 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EMBL:ACUP02010293 | InterPro:Aspartic_peptidase_A1 | EnsemblPlantsGene:GLYMA_17G016500 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | UniProt:I1MR85 | InterPro:IPR021109 | InterPro:IPR033121 |
| EnsemblPlants:KRH02113 | ProteinID:KRH02113 | ProteinID:KRH02113.1 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 |
| PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF553 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-TM |
| InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI0002965EF0 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:-:1225615..1227439
Molecular Weight (calculated)
46729.8 Da
IEP (calculated)
5.583
GRAVY (calculated)
0.112
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSLATMAY SFAMIISFLL CLMSTLSHSL SPVWFLIPVT KDASTLQYIT TLSYGTPLLP TKLVLDLGGP FLWLHCASRN TPSSSSLTTP HRSLQCFTAK
101: THKSTNSFLS SPVDEVHQYH PCQVFPENSI TGTVASEGEL VEDLMALQSP QEEEGGQLVE HQSLFTCSPT TLLNGLARGA RGMLGLGRSR SSFPSQVFDN
201: FSTHRKLTLC LSSSKGVVLL GNVATYESEV LKSLTFTPLI TSFPRQEYII NVSSVKINGN RLSLDTSSSE SSNEQDGSVG ALTLLSTILP YTTMQSSIYN
301: SFKTSFEDAA VAMNMTRVAS VAPFELCFSS RGEQAGPSVP VIELVLQSEM VKWTIHGRNS MVRVSDEVVC LGFLDGGVNP RNSIVIGGYQ LEDVVVQFDL
401: ATSMVGFSSS LVAKNTKCSD FKFASSITAD SI
101: THKSTNSFLS SPVDEVHQYH PCQVFPENSI TGTVASEGEL VEDLMALQSP QEEEGGQLVE HQSLFTCSPT TLLNGLARGA RGMLGLGRSR SSFPSQVFDN
201: FSTHRKLTLC LSSSKGVVLL GNVATYESEV LKSLTFTPLI TSFPRQEYII NVSSVKINGN RLSLDTSSSE SSNEQDGSVG ALTLLSTILP YTTMQSSIYN
301: SFKTSFEDAA VAMNMTRVAS VAPFELCFSS RGEQAGPSVP VIELVLQSEM VKWTIHGRNS MVRVSDEVVC LGFLDGGVNP RNSIVIGGYQ LEDVVVQFDL
401: ATSMVGFSSS LVAKNTKCSD FKFASSITAD SI
001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
Arabidopsis Description
AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.