Factsheet for AT5G19120.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 5
endoplasmic reticulum 6
plasma membrane 4
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92553	Canola	endoplasmic reticulum, vacuole	77.98	79.21
CDY13979	Canola	endoplasmic reticulum, vacuole	76.94	77.55
Bra002214.1-P	Field mustard	endoplasmic reticulum, extracellular	76.68	77.28
CDX88901	Canola	extracellular	76.42	76.23
CDY59021	Canola	endoplasmic reticulum, extracellular, plasma membrane	75.39	75.19
CDX70865	Canola	extracellular	76.17	75.19
CDY72428	Canola	extracellular	25.39	73.68
VIT_05s0020g02720.t01	Wine grape	extracellular, plasma membrane	37.56	39.62
KRH20901	Soybean	vacuole	38.08	36.48
KRH51036	Soybean	plasma membrane, vacuole	38.34	35.75
PGSC0003DMT400083215	Potato	extracellular	38.34	35.58
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	38.34	35.49
KRH11388	Soybean	plasma membrane, vacuole	36.79	35.24
KRH02113	Soybean	endoplasmic reticulum, vacuole	37.05	33.1
AT1G03220.1	Thale cress	endoplasmic reticulum, vacuole	35.23	31.41
AT1G03230.1	Thale cress	plasma membrane, vacuole	35.23	31.34
AT5G19100.1	Thale cress	endoplasmic reticulum, vacuole	26.94	26.6
AT5G19110.2	Thale cress	plastid	25.91	22.68
AT5G48430.1	Thale cress	extracellular, plasma membrane	22.02	20.94

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EntrezGene:832032	ProteinID:AED92655.1	ArrayExpress:AT5G19120	EnsemblPlantsGene:AT5G19120
RefSeq:AT5G19120	TAIR:AT5G19120	RefSeq:AT5G19120-TAIR-G	EnsemblPlants:AT5G19120.1	TAIR:AT5G19120.1	EMBL:AY045700
EMBL:AY055793	InterPro:Aspartic_peptidase_A1	Unigene:At.47575	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	RefSeq:NP_197413.1	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020003	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF553	InterPro:Peptidase_aspartic_dom_sf	UniProt:Q93VG3	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI000009E151	InterPro:Xylanase_inhibitor_I-like	SEG:seg	:	:

Description

AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]

Coordinates

chr5:+:6414488..6415907

Molecular Weight (calculated)

40706.8 Da

IEP (calculated)

5.452

GRAVY (calculated)

0.227

Length

386 amino acids

Sequence
(BLAST)

001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.