CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72428	Canola	extracellular	33.5	98.5
CDX88901	Canola	extracellular	85.42	86.3
CDY59021	Canola	endoplasmic reticulum, extracellular, plasma membrane	84.4	85.27
CDX92553	Canola	endoplasmic reticulum, vacuole	75.45	77.63
CDY13979	Canola	endoplasmic reticulum, vacuole	75.45	77.02
AT5G19120.1	Thale cress	endoplasmic reticulum, vacuole	75.19	76.17
VIT_05s0020g02720.t01	Wine grape	extracellular, plasma membrane	37.08	39.62
KRH51036	Soybean	plasma membrane, vacuole	37.85	35.75
CDY37437	Canola	mitochondrion, plastid	10.49	34.75
KRH20901	Soybean	vacuole	35.55	34.49
KRH11388	Soybean	plasma membrane, vacuole	35.55	34.49
PGSC0003DMT400083215	Potato	extracellular	36.57	34.38
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	36.57	34.29
KRH02113	Soybean	endoplasmic reticulum, vacuole	36.57	33.1
CDX86682	Canola	endoplasmic reticulum, vacuole	33.5	31.57
CDY15456	Canola	endoplasmic reticulum, vacuole	33.25	31.33
CDY32500	Canola	endoplasmic reticulum, vacuole	34.27	30.88
CDY13973	Canola	cytosol	6.65	30.23
CDY13976	Canola	cytosol	6.91	29.67
CDY15455	Canola	endoplasmic reticulum, vacuole	32.23	29.17
CDY02589	Canola	plastid	20.46	28.67
CDY02584	Canola	cytosol	8.95	28.46
CDY13967	Canola	cytosol	13.04	27.72
CDY37436	Canola	endoplasmic reticulum, plasma membrane	20.46	27.03
CDY47196	Canola	extracellular	27.37	26.42
CDX92555	Canola	extracellular	24.3	26.24
CDY36265	Canola	mitochondrion	13.81	26.09
CDX92557	Canola	extracellular	28.39	26.06
CDY30827	Canola	extracellular, vacuole	26.09	25.69
CDX83218	Canola	extracellular, plastid	26.34	25.5
CDY47198	Canola	cytosol, nucleus, plasma membrane	24.81	25.19
CDY47197	Canola	extracellular, plasma membrane	24.81	24.94
CDY13961	Canola	extracellular	27.88	24.77
CDY02588	Canola	extracellular, plasma membrane	25.06	24.69
CDY70079	Canola	extracellular, plasma membrane, vacuole	27.88	24.66
CDY13974	Canola	extracellular	18.16	24.57
CDY13970	Canola	extracellular, plasma membrane	23.79	24.54
CDY13962	Canola	extracellular, plasma membrane	24.3	22.84
CDX92556	Canola	extracellular, plasma membrane	24.3	22.84
CDY13977	Canola	plasma membrane	16.37	22.15
CDY13972	Canola	cytosol	5.88	21.3
CDY00058	Canola	extracellular, plasma membrane	21.74	21.09
CDY19949	Canola	plasma membrane	21.48	20.84
CDY21504	Canola	extracellular	24.81	16.96
CDY02583	Canola	plasma membrane	10.49	12.02

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078C1U7	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDX70865	ProteinID:CDX70865
ProteinID:CDX70865.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00140763001	InterPro:IPR021109	InterPro:IPR033121
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF553
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0004EB342B
SEG:seg	:	:	:	:	:

Description

BnaC03g09490D

Coordinates

chrLK031791:+:2443767..2444942

Molecular Weight (calculated)

40814.7 Da

IEP (calculated)

4.733

GRAVY (calculated)

0.270

Length

391 amino acids

Sequence
(BLAST)

001: MASSTSCLNL FVFSFLSVLL ITKSQISGSV NGVVFPVTRD LSTGQYVAEI RLGDSYEPVN LVVDLSGTLL WFDCTSGHIS TSRSLISGSS SGCLKAKAGN
101: DRVSSRGDQN GDCELLVRNG VVGITARGEL ATDVLSYGSV ASQGTVDLLF ACAPPLLLRG LPSGAQGVMG LSKAQISLPS QLAAETNEPR RLTVYLSPSN
201: GVVSTRSVED VFGAAAARSL VYTPLSTTSS GGYLINVKSI RVNGFMLAVN GTLSAELSTL VPYTTMESSL YAVFADAYVK AAASNAKSVA PVAPFGLCFT
301: STSSSDFPAV DLALQSEMVR WRIQGENLLV DVGGGVQCLG IVDGGSNRVS PITMGGLQLE GFVLDFDLGN SVMGFGERTR SSLDSFRQEA L

Best Arabidopsis Sequence Match ( AT5G19120.1 )
(BLAST)

001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL

Arabidopsis Description

AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.