CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023705.1-P	Field mustard	cytosol, plasma membrane, plastid	98.44	98.44
CDY02584	Canola	cytosol	28.31	88.62
CDY13973	Canola	cytosol	13.77	61.63
AT5G19110.2	Thale cress	plastid	69.87	61.0
CDY13967	Canola	cytosol	28.05	58.7
CDY02588	Canola	extracellular, plasma membrane	60.52	58.69
CDY47197	Canola	extracellular, plasma membrane	58.7	58.1
CDX92556	Canola	extracellular, plasma membrane	61.04	56.49
CDY13962	Canola	extracellular, plasma membrane	60.78	56.25
CDX92555	Canola	extracellular	50.91	54.14
CDY13974	Canola	extracellular	40.26	53.63
CDY13970	Canola	extracellular, plasma membrane	51.69	52.51
CDY13977	Canola	plasma membrane	35.58	47.4
CDY13976	Canola	cytosol	11.17	47.25
CDY13972	Canola	cytosol	13.25	47.22
CDY02583	Canola	plasma membrane	39.22	44.28
CDY37437	Canola	mitochondrion, plastid	13.25	43.22
KRH02114	Soybean	nucleus	37.92	32.44
KRH11387	Soybean	cytosol	28.57	31.16
CDY02589	Canola	plastid	22.34	30.82
CDY47196	Canola	extracellular	31.17	29.63
CDY32500	Canola	endoplasmic reticulum, vacuole	33.25	29.49
KRH51876	Soybean	nucleus	33.51	29.05
CDY15455	Canola	endoplasmic reticulum, vacuole	32.21	28.7
CDX86682	Canola	endoplasmic reticulum, vacuole	30.91	28.67
CDY15456	Canola	endoplasmic reticulum, vacuole	30.65	28.43
CDX83218	Canola	extracellular, plastid	29.61	28.22
CDX92557	Canola	extracellular	30.91	27.93
KRH20900	Soybean	extracellular, vacuole	30.91	27.74
CDY70079	Canola	extracellular, plasma membrane, vacuole	31.69	27.6
CDY13961	Canola	extracellular	31.43	27.5
KRH20899	Soybean	endoplasmic reticulum	33.77	27.48
CDY30827	Canola	extracellular, vacuole	28.31	27.46
CDY13979	Canola	endoplasmic reticulum, vacuole	25.45	25.59
CDX92553	Canola	endoplasmic reticulum, vacuole	25.19	25.53
KRH11386	Soybean	endoplasmic reticulum	27.27	24.94
CDX70865	Canola	extracellular	25.19	24.81
CDY19949	Canola	plasma membrane	25.45	24.32
CDX88901	Canola	extracellular	24.42	24.29
CDY00058	Canola	extracellular, plasma membrane	25.19	24.07
CDY59021	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.16	24.03
CDY36265	Canola	mitochondrion	12.73	23.67
CDY21504	Canola	extracellular	27.79	18.71
CDY37436	Canola	endoplasmic reticulum, plasma membrane	14.29	18.58
CDY72428	Canola	extracellular	5.45	15.79

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078IDC5	UniProt:A0A078IDC5	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDY47198
ProteinID:CDY47198	ProteinID:CDY47198.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00086905001	InterPro:IPR021109
InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF532	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0004EE295E
SEG:seg	:	:	:	:	:

Description

BnaAnng08680DBnaAnng08680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDC5]

Coordinates

chrLK032702:-:107795..109276

Molecular Weight (calculated)

41412.3 Da

IEP (calculated)

4.649

GRAVY (calculated)

0.064

Length

385 amino acids

Sequence
(BLAST)

001: MILTSQAQYL LPITKHEPTQ QFYTTLDIGT TVKSPLNLLL DLGTNLTWLN CHQLQSLTSL HTIACDSDSC KVIPGNGCNE NSCLYQQPNP LGSENITGRV
101: VQDAASFSTT DGGNLLSQVS LRIFTFSCAY NLQGVSPPVD GVLSLSPGSS SFTKQVTSDF NVIPKLALCL PSYGTGRFYV AGVYYIIPPF DNSTNQIPKT
201: LTPMRTDSGD YLISVQSIYV DGTPLTLNPN LLLGGVGAKL STVVPYTVLH TDIYNALAQS FTLKAEAMGI SKVASVAPFK DCFDAQNVAG KDMTGPNVPK
301: IEFGLPGKTG EVTWGFYGAN TMVKASEMVM CLAFYDGGMN PNDWVVIGTH QLQEYLLEFD LSTSTFAFSD SLLLHSTTCS STSPS

Best Arabidopsis Sequence Match ( AT5G19110.1 )
(BLAST)

001: MGSSLTRLLV FLSIFAAIAL KSNSQYLLPI TKHEPTNLFY TTFNVGSAAK SPVNLLLDLG TNLTWLDCRK LKSLSSLRLV TCQSSTCKSI PGNGCAGKSC
101: LYKQPNPLGQ NPVVTGRVVQ DRASLYTTDG GKFLSQVSVR HFTFSCAGEK ALQGLPPPVD GVLALSPGSS SFTKQVTSAF NVIPKFSLCL PSSGTGHFYI
201: AGIHYFIPPF NSSDNPIPRT LTPIKGTDSG DYLITVKSIY VGGTALKLNP DLLTGGAKLS TVVHYTVLQT DIYNALAQSF TLKAKAMGIA KVPSVAPFKH
301: CFDSRTAGKN LTAGPNVPVI EIGLPGRIGE VKWGFYGANT VVKVKETVMC LAFIDGGKTP KDLMVIGTHQ LQDHMLEFDF SGTVLAFSES LLLHNTSCST
401: WPSQK

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:TAIR;Acc:AT5G19110]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.