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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47198 Canola cytosol, nucleus, plasma membrane 44.28 39.22
CDY13974 Canola extracellular 27.27 32.18
CDY13977 Canola plasma membrane 26.98 31.83
CDX92556 Canola extracellular, plasma membrane 31.09 25.48
CDY47197 Canola extracellular, plasma membrane 29.03 25.45
CDY13962 Canola extracellular, plasma membrane 30.79 25.24
CDY02588 Canola extracellular, plasma membrane 29.03 24.94
CDY13970 Canola extracellular, plasma membrane 24.34 21.9
CDX92555 Canola extracellular 22.29 20.99
CDY37436 Canola endoplasmic reticulum, plasma membrane 13.78 15.88
CDY72428 Canola extracellular 5.87 15.04
CDX92557 Canola extracellular 15.25 12.21
CDY13961 Canola extracellular 15.54 12.05
CDY70079 Canola extracellular, plasma membrane, vacuole 15.54 11.99
KRH11387 Soybean cytosol 11.73 11.33
KRH11386 Soybean endoplasmic reticulum 13.78 11.16
CDY32500 Canola endoplasmic reticulum, vacuole 14.08 11.06
KRH51876 Soybean nucleus 14.37 11.04
KRH02114 Soybean nucleus 14.37 10.89
CDX83218 Canola extracellular, plastid 12.61 10.64
KRH20899 Soybean endoplasmic reticulum 14.66 10.57
CDX92553 Canola endoplasmic reticulum, vacuole 11.73 10.53
CDX70865 Canola extracellular 12.02 10.49
CDY19949 Canola plasma membrane 12.32 10.42
CDY00058 Canola extracellular, plasma membrane 12.32 10.42
CDY47196 Canola extracellular 12.02 10.12
CDY30827 Canola extracellular, vacuole 11.73 10.08
KRH20900 Soybean extracellular, vacuole 12.61 10.02
CDY13979 Canola endoplasmic reticulum, vacuole 11.14 9.92
CDY15455 Canola endoplasmic reticulum, vacuole 12.32 9.72
CDY59021 Canola endoplasmic reticulum, extracellular, plasma membrane 10.85 9.56
CDX88901 Canola extracellular 10.56 9.3
CDY15456 Canola endoplasmic reticulum, vacuole 10.85 8.92
CDY36265 Canola mitochondrion 5.28 8.7
CDX86682 Canola endoplasmic reticulum, vacuole 10.56 8.67
CDY02589 Canola plastid 6.16 7.53
CDY21504 Canola extracellular 12.32 7.34
CDY13973 Canola cytosol 0.88 3.49
CDY13976 Canola cytosol 0.88 3.3
CDY13972 Canola cytosol 0.88 2.78
CDY13967 Canola cytosol 1.47 2.72
CDY02584 Canola cytosol 0.88 2.44
CDY37437 Canola mitochondrion, plastid 0.29 0.85
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078ESQ1InterPro:Aspartic_peptidase_A1EnsemblPlants:CDY02583ProteinID:CDY02583
ProteinID:CDY02583.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538GO:GO:0042765EnsemblPlantsGene:GSBRNA2T00114684001
InterPro:Gaa1InterPro:IPR021109PFAM:PF04114PFAM:PF14543PANTHER:PTHR13683PANTHER:PTHR13683:SF532
InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630InterPro:TAXi_NTMHMM:TMhelixUniPathway:UPA00196UniParc:UPI0004EC5F75
SEG:seg:::::
Description
BnaC02g08520D
Coordinates
chrLK031936:+:105240..107630
Molecular Weight (calculated)
37376.3 Da
IEP (calculated)
9.512
GRAVY (calculated)
0.036
Length
341 amino acids
Sequence
(BLAST)
001: MITLCLLCKH RSLHTAFALL VAPFPVVAAS LYIDGYNSLT KVTHNPAETS NHGNVTISAA FIVLCLMSII NFTTAEIGAL LLVPMCLMVR PVKPDLRSRR
101: VKILLRALCN MVLVTIAFSS IFITNQPTKR TLKKTKDGQT LLPLHFRGHD SDVTSSIPSS DHKTRTHQTI LHHSRHRNHR KNSTKPLLDL GTNLTWLNCH
201: QLQSLTSLHT VACDSDSCEV TPGNGCNENS CLYKQPNPLG SQNITSRVVQ DAASFSTTDG GNFLSQVSLR IFTFSCAYNL QGVSPPVDGV LSLSPGSSSF
301: TKQVTSDFNV IPKLALCLPS YGTGRFYVAG VYLKLHQTQR L
Best Arabidopsis Sequence Match ( AT5G19130.2 )
(BLAST)
001: MAAVNRDNEE EVKTDDGSPK IKPRPIVRLG IFLIAHSPVF SVVFSAAGVL ALLLLPLLAK NTYISENALM PGSARSMLSN RDVSDGSKLV KDIKNFRLNH
101: EGQVQKLIGK YMSDMGAEVS YQKFHPEGNQ FHPLHFFSGP DSYTLLENVS CASYGVNVAG IIRAPRGDGK ESIVLVTPYD FINGGDYEDL SLGIVSSLFS
201: LLSRVTWLSK DIIWLVADSR YGDYRPVAAW LTEYHSPSFK VSDLLKCDEQ NTADNFRRAG TMAAALVLKV DGRSEKFEDT LSIYAEASNG QMPNLDLINV
301: VNYLAVHRQG FYVKVEKVVS LLSSSWLKIF GEIFEAVGKL AHMLNPDWNF GIPAADYLEG SATLASSLYS QALGIPTGPH GAFRDYQVDA ITLKVSPRFP
401: PDSKTRQHDF FLRGARLLEG TIRSVNNLLE KFHQSFFLYM LTSPSKFISV GVYMIAFALL VAPLPMVAAS LYIDGCKSLT NSTHNPTENF KSWKWLDAAK
501: QVFTLHLLGF IVTLLPYFIC QVPGQHSPTN RSIMWGTTSS SLLLITFVTM PGCSPFSSRL HGTNWAILKS VTISAAFIGL CLMSIINFAT AEIGALLLVP
601: TCLMAQPIKP ALRSRRLKSL LGAFCSIVLL TIGFPVMFFA ISKGLLGEGL VGLSLGGEFW TWLESLWAWK SATYLYIGMV HLPCWLLCLC ILFHPS
Arabidopsis Description
GPI transamidase component family protein / Gaa1-like family protein [Source:UniProtKB/TrEMBL;Acc:F4JZM4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.