CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72428	Canola	extracellular	14.49	22.56
CDX83218	Canola	extracellular, plastid	37.2	19.06
CDY47196	Canola	extracellular	32.85	16.79
CDY30827	Canola	extracellular, vacuole	31.4	16.37
CDY15456	Canola	endoplasmic reticulum, vacuole	31.88	15.9
CDX86682	Canola	endoplasmic reticulum, vacuole	30.92	15.42
CDY32500	Canola	endoplasmic reticulum, vacuole	30.43	14.52
KRH02114	Soybean	nucleus	30.92	14.22
CDY13974	Canola	extracellular	19.81	14.19
CDY02589	Canola	plastid	18.84	13.98
CDY15455	Canola	endoplasmic reticulum, vacuole	28.99	13.89
KRH11387	Soybean	cytosol	23.67	13.88
CDY13979	Canola	endoplasmic reticulum, vacuole	25.6	13.84
CDX70865	Canola	extracellular	26.09	13.81
KRH20900	Soybean	extracellular, vacuole	28.5	13.75
CDX88901	Canola	extracellular	25.6	13.7
KRH11386	Soybean	endoplasmic reticulum	27.54	13.54
KRH51876	Soybean	nucleus	28.99	13.51
CDY13970	Canola	extracellular, plasma membrane	24.64	13.46
CDY37436	Canola	endoplasmic reticulum, plasma membrane	18.84	13.18
CDX92553	Canola	endoplasmic reticulum, vacuole	24.15	13.16
CDY21504	Canola	extracellular	36.23	13.11
CDY59021	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.15	12.92
KRH20899	Soybean	endoplasmic reticulum	29.47	12.9
CDY47198	Canola	cytosol, nucleus, plasma membrane	23.67	12.73
CDX92557	Canola	extracellular	25.12	12.21
CDX92555	Canola	extracellular	20.77	11.88
CDY02588	Canola	extracellular, plasma membrane	21.74	11.34
CDY47197	Canola	extracellular, plasma membrane	21.26	11.31
CDY13961	Canola	extracellular	23.67	11.14
CDY70079	Canola	extracellular, plasma membrane, vacuole	23.67	11.09
CDY02584	Canola	cytosol	6.28	10.57
CDX92556	Canola	extracellular, plasma membrane	20.77	10.34
CDY13962	Canola	extracellular, plasma membrane	20.77	10.34
CDY13967	Canola	cytosol	9.18	10.33
CDY19949	Canola	plasma membrane	19.81	10.17
CDY00058	Canola	extracellular, plasma membrane	19.81	10.17
CDY37437	Canola	mitochondrion, plastid	5.8	10.17
CDY13977	Canola	plasma membrane	13.53	9.69
CDY13976	Canola	cytosol	3.86	8.79
CDY13972	Canola	cytosol	3.38	6.48
CDY02583	Canola	plasma membrane	8.7	5.28
CDY13973	Canola	cytosol	1.93	4.65

Protein Annotations

Gene3D:2.40.70.10	MapMan:35.2	UniProt:A0A078HCZ3	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDY36265	ProteinID:CDY36265
ProteinID:CDY36265.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00060228001	InterPro:IPR021109	PFAM:PF14541
PFAM:PF14543	PANTHER:PTHR13683	PANTHER:PTHR13683:SF268	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0004EDE9C7	:	:	:	:

Description

BnaA01g31530DBnaA01g31530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCZ3]

Coordinates

chrLK032372:+:3299..4317

Molecular Weight (calculated)

23135.1 Da

IEP (calculated)

9.741

GRAVY (calculated)

-0.063

Length

207 amino acids

Sequence
(BLAST)

001: MARLFILNPK PRPKQNSHAF VLPVFKDTKT GIYYTNVTVG KPSLVVNLAV DVRGSALWFQ CDKLGYNSTN YTPILCGSNC CKQTKNQNDT CHAYLQTQMT
101: YNTVLASLVK DDVVLSYTSP STKLAARLPL ACMSWPGFRM VLRAFSDSTS HWGGTKIPYT LLETSIYKAL VKAFVGKAQK QKAVYPFTDC FSLKILEENL
201: CFTSLKT

Best Arabidopsis Sequence Match ( AT5G19120.1 )
(BLAST)

001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL

Arabidopsis Description

AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.