CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20900	Soybean	extracellular, vacuole	53.83	55.71
KRH20899	Soybean	endoplasmic reticulum	59.23	55.6
KRH02114	Soybean	nucleus	43.69	43.11
CDY13973	Canola	cytosol	8.33	43.02
KRH11387	Soybean	cytosol	33.11	41.64
CDY02589	Canola	plastid	25.23	40.14
CDY02584	Canola	cytosol	11.04	39.84
KRH71440	Soybean	extracellular	37.84	38.62
KRH11386	Soybean	endoplasmic reticulum	35.59	37.53
CDY13967	Canola	cytosol	15.09	36.41
KRH32004	Soybean	endoplasmic reticulum	22.52	35.71
CDY30827	Canola	extracellular, vacuole	31.76	35.52
CDY13976	Canola	cytosol	7.21	35.16
Bra023703.1-P	Field mustard	extracellular	31.98	35.06
CDY47196	Canola	extracellular	31.98	35.06
CDX92557	Canola	extracellular	33.56	34.98
KRG92423	Soybean	nucleus	34.46	34.93
Bra002210.1-P	Field mustard	extracellular	33.11	34.75
AT5G19100.1	Thale cress	endoplasmic reticulum, vacuole	30.41	34.53
KRH34381	Soybean	endoplasmic reticulum, plasma membrane	34.46	34.46
KRH11388	Soybean	plasma membrane, vacuole	31.08	34.24
CDX83218	Canola	extracellular, plastid	31.08	34.16
Bra000556.1-P	Field mustard	extracellular, plastid	30.86	33.91
KRH20901	Soybean	vacuole	30.63	33.75
CDY13970	Canola	extracellular, plasma membrane	28.6	33.51
CDY47198	Canola	cytosol, nucleus, plasma membrane	29.05	33.51
CDY13972	Canola	cytosol	8.11	33.33
Bra023705.1-P	Field mustard	cytosol, plasma membrane, plastid	28.6	32.99
CDY13961	Canola	extracellular	32.66	32.95
KRH51036	Soybean	plasma membrane, vacuole	30.63	32.85
CDY70079	Canola	extracellular, plasma membrane, vacuole	32.43	32.58
KRH02113	Soybean	endoplasmic reticulum, vacuole	31.31	32.18
Bra034134.1-P	Field mustard	extracellular, plasma membrane	29.28	31.94
KRH67173	Soybean	nucleus	30.18	31.38
AT5G19110.2	Thale cress	plastid	30.18	30.39
Bra002212.1-P	Field mustard	extracellular	24.55	30.28
Bra023704.1-P	Field mustard	extracellular, plasma membrane	26.35	30.08
KRG96855	Soybean	endoplasmic reticulum	29.28	30.02
KRH68584	Soybean	nucleus	28.83	29.98
CDY47197	Canola	extracellular, plasma membrane	26.13	29.82
CDX92556	Canola	extracellular, plasma membrane	27.93	29.81
CDX92555	Canola	extracellular	24.1	29.56
CDY02588	Canola	extracellular, plasma membrane	26.35	29.47
CDY13962	Canola	extracellular, plasma membrane	27.48	29.33
CDY36265	Canola	mitochondrion	13.51	28.99
Bra002211.1-P	Field mustard	extracellular, plasma membrane	27.03	28.85
CDY13974	Canola	extracellular	18.24	28.03
CDY13977	Canola	plasma membrane	17.12	26.3
CDY21504	Canola	extracellular	29.28	22.73
CDY02583	Canola	plasma membrane	11.04	14.37

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EMBL:ACUP02003395	InterPro:Aspartic_peptidase_A1	EnsemblPlantsGene:GLYMA_06G033600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	UniProt:K7KSV5
EnsemblPlants:KRH51876	ProteinID:KRH51876	ProteinID:KRH51876.1	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF268	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM
InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI00023C26A0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:2588818..2590152

Molecular Weight (calculated)

47373.3 Da

IEP (calculated)

8.251

GRAVY (calculated)

0.140

Length

444 amino acids

Sequence
(BLAST)

001: MASSSCSAAT IHFILLSISL FSVSSLPLPD ESTSKPKKIF FLPIKIDAAT NMFYTTIGIG TPQHSTNLVI DLGGENLWHD CSNRRYNSSS KRKIVCKSKK
101: CPEGAACVST GCIGPYKPGC AISDCTITVS NPLAQFSSSY TMVEDTIFLS HTYIPGFLAG CVDLDDGLSG NALQGLPRTS KGIIGFSHSE LALPSQLVLS
201: NKLIPKFSLC FPSSNNLKGF GNIFIGAGGG HPQVESKFLQ TTPLVVNPVA TGAVSIYGAP SIEYFIDVKA IKIDGHVLNL NSSLLSIDKK GNGGTKISTM
301: TPWTELHSSL YKPFVQEFIN KAEGRRMKRV APVPPFDACF DTSTIRNSIT GLAVPSIDLV LPGGAQWTIY GANSMTVMTS KNVACLAFVD GGMKPKEMHS
401: IQLEASVVIG GHQLEDNLLV IDMASSKLSF SSSLLLRNAT CSHV

Best Arabidopsis Sequence Match ( AT5G19110.2 )
(BLAST)

001: MYFTSINNIH RSPSPSQTIT FIISFTKKNY NLNIIEMGSS LTRLLVFLSI FAAIALKSNS QYLLPITKHE PTNLFYTTFN VGSAAKSPVN LLLDLGTNLT
101: WLDCRKLKSL SSLRLVTCQS STCKSIPGNG CAGKSCLYKQ PNPLGQNPVV TGRVVQDRAS LYTTDGGKFL SQVSVRHFTF SCAGEKALQG LPPPVDGVLA
201: LSPGSSSFTK QVTSAFNVIP KFSLCLPSSG TGHFYIAGIH YFIPPFNSSD NPIPRTLTPI KGTDSGDYLI TVKSIYVGGT ALKLNPDLLT GGAKLSTVVH
301: YTVLQTDIYN ALAQSFTLKA KAMGIAKVPS VAPFKHCFDS RTAGKNLTAG PNVPVIEIGL PGRIGEVKWG FYGANTVVKV KETVMCLAFI DGGKTPKDLM
401: VIGTHQLQDH MLEFDFSGTV LAFSESLLLH NTSCSTWPSQ K

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:TAIR;Acc:AT5G19110]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.