Factsheet for Bra023704.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
mitochondrion 1
plasma membrane 5
extracellular 4
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47197	Canola	extracellular, plasma membrane	99.74	99.74
Bra002212.1-P	Field mustard	extracellular	63.24	68.33
Bra002211.1-P	Field mustard	extracellular, plasma membrane	72.49	67.79
Bra023705.1-P	Field mustard	cytosol, plasma membrane, plastid	57.33	57.92
KRH11387	Soybean	cytosol	28.53	31.44
Bra023703.1-P	Field mustard	extracellular	29.56	28.4
KRH02114	Soybean	nucleus	31.62	27.33
Bra032555.1-P	Field mustard	endoplasmic reticulum, vacuole	29.31	26.39
KRH51876	Soybean	nucleus	30.08	26.35
KRH11386	Soybean	endoplasmic reticulum	28.28	26.13
KRH20900	Soybean	extracellular, vacuole	28.79	26.11
Bra000556.1-P	Field mustard	extracellular, plastid	26.74	25.74
Bra002214.1-P	Field mustard	endoplasmic reticulum, extracellular	24.94	25.33
Bra030525.1-P	Field mustard	extracellular, vacuole	29.05	25.22
KRH20899	Soybean	endoplasmic reticulum	30.59	25.16
Bra002210.1-P	Field mustard	extracellular	27.25	25.06
Bra030526.1-P	Field mustard	plasma membrane, vacuole	26.22	24.64
Bra034134.1-P	Field mustard	extracellular, plasma membrane	25.71	24.57
Bra036172.1-P	Field mustard	extracellular, plasma membrane	22.36	21.59

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	EnsemblPlantsGene:Bra023704	EnsemblPlants:Bra023704.1	EnsemblPlants:Bra023704.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	UniProt:M4E4K1	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF532	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002543213	SEG:seg

Description

AT5G19110 (E=4e-120) | extracellular dermal glycoprotein-related / EDGP-related

Coordinates

chrA02:-:4663456..4665027

Molecular Weight (calculated)

42070.0 Da

IEP (calculated)

9.398

GRAVY (calculated)

0.021

Length

389 amino acids

Sequence
(BLAST)

001: MGGLMRLTVS LSMFAAITLT SQAQYLLPIT KDEPTKQFYT TLDIDSAAKS PVNLLLDLQT SLTWLNCRKL KSLSLLRLVT CQSSTCKSIP GNGCDGNTCL
101: YRQPTPLGVT PVVTTGRVVQ DRATVSKASL PRFTFSCAEE KRIQGLAPQL AGVIGLSPGQ FPFWRQVTSA FNIIPKFALC LPSSGTGHFY IGGVKGGNNR
201: VPMTLTPLKN IGSGDYLLSV QSFYVGGSPL SLSPSLLEGG ARLSTVVPYT VLQTDIYNAL ARSFTQKATK IGMFEAPGHA PFTDCFDEGA SSRNKRGLKN
301: VPVIEIGVPG RAGEVKWSFH GENTVVRVME TVICLAFVDG GKKPKESMVI GTHQLQDYMI DFDFSTTLMA FSDSLLLHNT SCSTRPSRK

Best Arabidopsis Sequence Match ( AT5G19110.2 )
(BLAST)

001: MYFTSINNIH RSPSPSQTIT FIISFTKKNY NLNIIEMGSS LTRLLVFLSI FAAIALKSNS QYLLPITKHE PTNLFYTTFN VGSAAKSPVN LLLDLGTNLT
101: WLDCRKLKSL SSLRLVTCQS STCKSIPGNG CAGKSCLYKQ PNPLGQNPVV TGRVVQDRAS LYTTDGGKFL SQVSVRHFTF SCAGEKALQG LPPPVDGVLA
201: LSPGSSSFTK QVTSAFNVIP KFSLCLPSSG TGHFYIAGIH YFIPPFNSSD NPIPRTLTPI KGTDSGDYLI TVKSIYVGGT ALKLNPDLLT GGAKLSTVVH
301: YTVLQTDIYN ALAQSFTLKA KAMGIAKVPS VAPFKHCFDS RTAGKNLTAG PNVPVIEIGL PGRIGEVKWG FYGANTVVKV KETVMCLAFI DGGKTPKDLM
401: VIGTHQLQDH MLEFDFSGTV LAFSESLLLH NTSCSTWPSQ K

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:TAIR;Acc:AT5G19110]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.