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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13962 Canola extracellular, plasma membrane 94.95 94.95
CDX92556 Canola extracellular, plasma membrane 94.47 94.47
Bra023704.1-P Field mustard extracellular, plasma membrane 67.79 72.49
Bra002212.1-P Field mustard extracellular 57.45 66.39
Bra023705.1-P Field mustard cytosol, plasma membrane, plastid 56.01 60.52
KRH02114 Soybean nucleus 31.73 29.33
KRH11387 Soybean cytosol 24.76 29.18
Bra032555.1-P Field mustard endoplasmic reticulum, vacuole 29.33 28.24
Bra030525.1-P Field mustard extracellular, vacuole 30.05 27.9
Bra023703.1-P Field mustard extracellular 26.92 27.65
Bra002210.1-P Field mustard extracellular 27.88 27.42
Bra030526.1-P Field mustard plasma membrane, vacuole 26.92 27.05
KRH51876 Soybean nucleus 28.85 27.03
Bra000556.1-P Field mustard extracellular, plastid 25.72 26.49
KRH20899 Soybean endoplasmic reticulum 30.05 26.43
KRH20900 Soybean extracellular, vacuole 27.16 26.34
Bra002214.1-P Field mustard endoplasmic reticulum, extracellular 23.8 25.85
KRH11386 Soybean endoplasmic reticulum 25.24 24.94
Bra034134.1-P Field mustard extracellular, plasma membrane 24.28 24.82
Bra036172.1-P Field mustard extracellular, plasma membrane 20.91 21.59
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10InterPro:Aspartic_peptidase_A1EnsemblPlantsGene:Bra002211EnsemblPlants:Bra002211.1EnsemblPlants:Bra002211.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0016787GO:GO:0019538InterPro:IPR021109InterPro:IPR033121UniProt:M4CDD0InterPro:PEPTIDASE_A1
PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF532InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI0002545354:
Description
AT5G19110 (E=3e-147) | extracellular dermal glycoprotein-related / EDGP-related
Coordinates
chrA10:+:10864005..10865523
Molecular Weight (calculated)
45485.1 Da
IEP (calculated)
7.669
GRAVY (calculated)
0.053
Length
416 amino acids
Sequence
(BLAST)
001: MGGLTRLIVF ISMFASITLM SEAQYLLPIV KHEPSKQYYT AFDIGSAEKS YATLVLDLET NLTWLNCREL KSLSSLRLIT CQSSTCKSIP GSGCDGKYCL
101: YRQPNPLGKP VTGRVVQDKA TFSTTDGGRQ LSEVSLPRFT FSCATQGLSL PIAGVLGLSP AGEFPFWRQV TRAFNVIPKF ALCLPSSVFD VGHFYVGGVN
201: GYIIPPFTGS SNPIPMNLTP LKNIESGKYI ISPTSIYVDG VPLSLNPSLL EGGAKLSTVV TYTVLQTDIY NALASAFTLK AKEIGMSEVP GMPEFPGFTP
301: FKTCFEEGSS RRDVEEFMNV PVIEIGLPGR AGEVKWKFHG ANTVVRVLET VICLAFADGG KKPTEPMVIG THQLQDYMIE FDLSTTRMAF SDSLLSHKTS
401: CSAWPSRRQD HSHMML
Best Arabidopsis Sequence Match ( AT5G19110.2 )
(BLAST)
001: MYFTSINNIH RSPSPSQTIT FIISFTKKNY NLNIIEMGSS LTRLLVFLSI FAAIALKSNS QYLLPITKHE PTNLFYTTFN VGSAAKSPVN LLLDLGTNLT
101: WLDCRKLKSL SSLRLVTCQS STCKSIPGNG CAGKSCLYKQ PNPLGQNPVV TGRVVQDRAS LYTTDGGKFL SQVSVRHFTF SCAGEKALQG LPPPVDGVLA
201: LSPGSSSFTK QVTSAFNVIP KFSLCLPSSG TGHFYIAGIH YFIPPFNSSD NPIPRTLTPI KGTDSGDYLI TVKSIYVGGT ALKLNPDLLT GGAKLSTVVH
301: YTVLQTDIYN ALAQSFTLKA KAMGIAKVPS VAPFKHCFDS RTAGKNLTAG PNVPVIEIGL PGRIGEVKWG FYGANTVVKV KETVMCLAFI DGGKTPKDLM
401: VIGTHQLQDH MLEFDFSGTV LAFSESLLLH NTSCSTWPSQ K
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:TAIR;Acc:AT5G19110]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.