Factsheet for Bra002214.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92553	Canola	endoplasmic reticulum, vacuole	92.17	92.89
CDY13979	Canola	endoplasmic reticulum, vacuole	91.91	91.91
AT5G19120.1	Thale cress	endoplasmic reticulum, vacuole	77.28	76.68
VIT_05s0020g02720.t01	Wine grape	extracellular, plasma membrane	38.38	40.16
KRH51036	Soybean	plasma membrane, vacuole	37.6	34.78
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	36.55	33.57
PGSC0003DMT400083215	Potato	extracellular	36.29	33.41
KRH20901	Soybean	vacuole	34.99	33.25
KRH11388	Soybean	plasma membrane, vacuole	33.94	32.26
KRH02113	Soybean	endoplasmic reticulum, vacuole	36.03	31.94
Bra030526.1-P	Field mustard	plasma membrane, vacuole	33.42	30.92
Bra032555.1-P	Field mustard	endoplasmic reticulum, vacuole	33.16	29.4
Bra030525.1-P	Field mustard	extracellular, vacuole	31.07	26.56
Bra002210.1-P	Field mustard	extracellular	29.24	26.48
Bra023705.1-P	Field mustard	cytosol, plasma membrane, plastid	26.37	26.23
Bra023703.1-P	Field mustard	extracellular	27.68	26.17
Bra002212.1-P	Field mustard	extracellular	24.54	26.11
Bra000556.1-P	Field mustard	extracellular, plastid	26.89	25.5
Bra034134.1-P	Field mustard	extracellular, plasma membrane	26.89	25.31
Bra023704.1-P	Field mustard	extracellular, plasma membrane	25.33	24.94
Bra002211.1-P	Field mustard	extracellular, plasma membrane	25.85	23.8
Bra036172.1-P	Field mustard	extracellular, plasma membrane	21.93	20.84

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	EnsemblPlantsGene:Bra002214	EnsemblPlants:Bra002214.1	EnsemblPlants:Bra002214.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	UniProt:M4CDD3	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF553	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002545198	SEG:seg

Description

AT5G19120 (E=2e-148) | aspartic-type endopeptidase

Coordinates

chrA10:-:10843494..10844645

Molecular Weight (calculated)

40253.4 Da

IEP (calculated)

5.408

GRAVY (calculated)

0.344

Length

383 amino acids

Sequence
(BLAST)

001: MASCLNLFVF SFLSILLISN SQITNPVIGV VFPVIRDLHT GQYIAQILLG DSSEPVKLVV DLSGLLLWFD CSSGHVSSSR SLVSGSSSGC LKAKVGDERV
101: SRNAECDLLV RNGAVGIAAR GELARDVLSF GSVSSPGTVD VLFACAPSWL LRGLASGVQG VMGLGRAQIS LPSQLAAETN DRRRLTLFLS QSNGVVSTSS
201: VEDVFGVAAS KALVYTPLSS GSSGSYVINV KSIRVDGKRL SVDGPLSVEL STVVPYTMLE SSVYTVLAEA YTKAATNAKS VAPIAPFSLC FTSSSEVEFP
301: AVDLSLQSEM VRWRIHGRNL MVDVGGGVRC LGIVDGGSNP VSPIIMGGLQ LEGFVLDFDL GNSMLGFGQR TRSTSESLQP ESL

Best Arabidopsis Sequence Match ( AT5G19120.1 )
(BLAST)

001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL

Arabidopsis Description

AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.