Factsheet for VIT_05s0020g02720.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 7
endoplasmic reticulum 5
vacuole 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g04450.t01	Wine grape	plastid	12.3	47.87
PGSC0003DMT400083215	Potato	extracellular	49.73	43.75
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	49.45	43.41
VIT_07s0104g00180.t01	Wine grape	endoplasmic reticulum, extracellular	50.82	42.66
KRH51036	Soybean	plasma membrane, vacuole	48.09	42.51
VIT_07s0005g04580.t01	Wine grape	plastid	15.3	41.18
VIT_07s0005g04570.t01	Wine grape	endoplasmic reticulum, extracellular	21.58	40.72
KRH02113	Soybean	endoplasmic reticulum, vacuole	47.54	40.28
VIT_05s0020g02730.t01	Wine grape	plasma membrane, vacuole	46.72	39.31
KRH20901	Soybean	vacuole	43.17	39.21
CDX92553	Canola	endoplasmic reticulum, vacuole	40.16	38.68
Bra002214.1-P	Field mustard	endoplasmic reticulum, extracellular	40.16	38.38
KRH11388	Soybean	plasma membrane, vacuole	41.8	37.97
CDY13979	Canola	endoplasmic reticulum, vacuole	39.62	37.86
AT5G19120.1	Thale cress	endoplasmic reticulum, vacuole	39.62	37.56
CDX70865	Canola	extracellular	39.62	37.08
VIT_14s0128g00210.t01	Wine grape	plasma membrane, vacuole	44.54	36.96
CDX88901	Canola	extracellular	39.07	36.95
CDY59021	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.25	36.18
VIT_07s0104g00190.t01	Wine grape	cytosol	9.56	33.98
CDY72428	Canola	extracellular	12.3	33.83
VIT_14s0128g00200.t01	Wine grape	extracellular, plasma membrane, vacuole	38.52	32.12
VIT_07s0005g04690.t01	Wine grape	plastid	11.48	30.88

Protein Annotations

EntrezGene:100259548	wikigene:100259548	MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	ProteinID:CCB50389
ProteinID:CCB50389.1	UniProt:F6HDL8	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100259548	wikigene:LOC100259548	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF553	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002109B0E	ArrayExpress:VIT_05s0020g02720
EnsemblPlantsGene:VIT_05s0020g02720	EnsemblPlants:VIT_05s0020g02720.t01	unigene:Vvi.14175	RefSeq:XP_002280508	RefSeq:XP_002280508.1	SEG:seg

Description

No Description!

Coordinates

chr5:+:4453502..4455917

Molecular Weight (calculated)

39209.8 Da

IEP (calculated)

8.555

GRAVY (calculated)

0.277

Length

366 amino acids

Sequence
(BLAST)

001: MALPLKPLFF FSFVSLVSGS YSLLLPVTKD AATLQYVTQI HHGTPLVPIK LVLDLGAPFL WLDCSSGHVS SSNTPILCGS IQCLTAKTSD SGHGGGTSTC
101: RLSPKNTITG LAEAGELAED MVAVEGSEMG SRFLFSCAPK PLLKGLASGT VGMLGLGRTR IALPSQLAAS VGLHRKFAVC LSSSEGTVFL ENEIAGTDVS
201: KSLMYTPLLP GQDPNSEGYF ISVKSIRING RGVSLGTITG GTRLSTVVPY TTMKRSVYDI FTKAYIKAAA SMNITRVESM APFGVCFRSE SSEPAVPTID
301: LVLQSEMVKW RILGRNSMVR VSDKVMCLGF LDGGVDPVYF FFFVHIKRHH QSNDTISISY VILFAP

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.