Factsheet for VIT_07s0104g00190.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g04580.t01	Wine grape	plastid	62.14	47.06
VIT_07s0005g04450.t01	Wine grape	plastid	25.24	27.66
VIT_07s0005g04690.t01	Wine grape	plastid	30.1	22.79
Solyc09g065000.2.1	Tomato	endoplasmic reticulum, vacuole	71.84	17.17
PGSC0003DMT400003025	Potato	endoplasmic reticulum, plasma membrane	68.93	16.51
KRH67173	Soybean	nucleus	66.02	15.93
VIT_07s0104g00180.t01	Wine grape	endoplasmic reticulum, extracellular	66.02	15.6
VIT_05s0020g02730.t01	Wine grape	plasma membrane, vacuole	64.08	15.17
VIT_14s0128g00210.t01	Wine grape	plasma membrane, vacuole	59.22	13.83
VIT_14s0128g00200.t01	Wine grape	extracellular, plasma membrane, vacuole	48.54	11.39
VIT_05s0020g02720.t01	Wine grape	extracellular, plasma membrane	33.98	9.56
VIT_07s0005g04570.t01	Wine grape	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

Gene3D:2.40.70.10	MapMan:35.1	InterPro:Aspartic_peptidase_A1	ProteinID:CCB56831	ProteinID:CCB56831.1	UniProt:F6HQ74
EMBL:FN596005	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF402	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
InterPro:TAXi_C	TIGR:TC70485	UniParc:UPI0002108024	ArrayExpress:VIT_07s0104g00190	EnsemblPlantsGene:VIT_07s0104g00190	EnsemblPlants:VIT_07s0104g00190.t01
RefSeq:XP_002272199	RefSeq:XP_002272199.1	:	:	:	:

Description

No Description!

Coordinates

chr7:+:1456175..1456665

Molecular Weight (calculated)

11500.9 Da

IEP (calculated)

6.231

GRAVY (calculated)

0.093

Length

103 amino acids

Sequence
(BLAST)

001: METTVGPAVP TVDLVMQSDD VFWRIFGRNS MVRILEEGVD VWCLGFVDGG VRPRTSIVIG GHQMEDNLLQ FDLGLKRLGF SSSVLVHHTM CANFNFTSNK
101: NLK

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.