Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 6
- vacuole 5
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX88901 | Canola | extracellular | 95.87 | 95.87 |
CDY72428 | Canola | extracellular | 29.2 | 84.96 |
CDX70865 | Canola | extracellular | 85.27 | 84.4 |
CDX92553 | Canola | endoplasmic reticulum, vacuole | 75.45 | 76.84 |
CDY13979 | Canola | endoplasmic reticulum, vacuole | 74.94 | 75.72 |
AT5G19120.1 | Thale cress | endoplasmic reticulum, vacuole | 75.19 | 75.39 |
VIT_05s0020g02720.t01 | Wine grape | extracellular, plasma membrane | 36.18 | 38.25 |
KRH51036 | Soybean | plasma membrane, vacuole | 37.21 | 34.78 |
PGSC0003DMT400083215 | Potato | extracellular | 36.69 | 34.13 |
Solyc01g080020.2.1 | Tomato | extracellular, plasma membrane | 36.43 | 33.81 |
KRH20901 | Soybean | vacuole | 35.14 | 33.75 |
KRH11388 | Soybean | plasma membrane, vacuole | 34.63 | 33.25 |
CDY37437 | Canola | mitochondrion, plastid | 10.08 | 33.05 |
KRH02113 | Soybean | endoplasmic reticulum, vacuole | 36.43 | 32.64 |
CDX86682 | Canola | endoplasmic reticulum, vacuole | 33.33 | 31.08 |
CDY15456 | Canola | endoplasmic reticulum, vacuole | 33.07 | 30.84 |
CDY32500 | Canola | endoplasmic reticulum, vacuole | 33.33 | 29.72 |
CDY15455 | Canola | endoplasmic reticulum, vacuole | 32.3 | 28.94 |
CDY13973 | Canola | cytosol | 6.2 | 27.91 |
CDY37436 | Canola | endoplasmic reticulum, plasma membrane | 21.19 | 27.7 |
CDY02589 | Canola | plastid | 19.38 | 26.88 |
CDY02584 | Canola | cytosol | 8.53 | 26.83 |
CDY13967 | Canola | cytosol | 12.66 | 26.63 |
CDY13976 | Canola | cytosol | 6.2 | 26.37 |
CDX92555 | Canola | extracellular | 24.03 | 25.69 |
CDY47196 | Canola | extracellular | 26.61 | 25.43 |
CDX83218 | Canola | extracellular, plastid | 26.36 | 25.25 |
CDY30827 | Canola | extracellular, vacuole | 25.32 | 24.69 |
CDY47197 | Canola | extracellular, plasma membrane | 24.81 | 24.68 |
CDX92557 | Canola | extracellular | 27.13 | 24.65 |
CDY13970 | Canola | extracellular, plasma membrane | 23.77 | 24.27 |
CDY13974 | Canola | extracellular | 18.09 | 24.22 |
CDY02588 | Canola | extracellular, plasma membrane | 24.81 | 24.18 |
CDY47198 | Canola | cytosol, nucleus, plasma membrane | 24.03 | 24.16 |
CDY36265 | Canola | mitochondrion | 12.92 | 24.15 |
CDY13961 | Canola | extracellular | 26.61 | 23.41 |
CDY70079 | Canola | extracellular, plasma membrane, vacuole | 26.61 | 23.3 |
CDY13962 | Canola | extracellular, plasma membrane | 23.26 | 21.63 |
CDX92556 | Canola | extracellular, plasma membrane | 23.26 | 21.63 |
CDY13972 | Canola | cytosol | 5.94 | 21.3 |
CDY13977 | Canola | plasma membrane | 15.76 | 21.11 |
CDY19949 | Canola | plasma membrane | 21.19 | 20.35 |
CDY00058 | Canola | extracellular, plasma membrane | 21.19 | 20.35 |
CDY21504 | Canola | extracellular | 25.06 | 16.96 |
CDY02583 | Canola | plasma membrane | 9.56 | 10.85 |
Protein Annotations
MapMan:19.4.3.1 | Gene3D:2.40.70.10 | GO:A0A078J4U1 | UniProt:A0A078J4U1 | InterPro:Aspartic_peptidase_A1 | EnsemblPlants:CDY59021 |
ProteinID:CDY59021 | ProteinID:CDY59021.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00025456001 | InterPro:IPR021109 |
InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 |
PANTHER:PTHR13683:SF553 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N |
TMHMM:TMhelix | UniParc:UPI0004EF15DB | SEG:seg | : | : | : |
Description
BnaCnng34100DBnaCnng34100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4U1]
Coordinates
chrLK033718:+:29987..31150
Molecular Weight (calculated)
40535.6 Da
IEP (calculated)
5.479
GRAVY (calculated)
0.224
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSCLNL FVFTFLSVFL ITKSQISYSV NGIVFPVTRD LLTGQYVSEI RLGDSSEPVK LVADLSGQLL WFDCSSEHLS SSRSLISGSS SGCLKAKAGN
101: DRALTRGDKN ADCDLLVRNG VVGITARGEL AADVLSLGSV SSQGTVDLLF ACAPPLLLRG LASGAQGVMG LGKAQISLPS QLAAETNERR RLTVYLSPSN
201: GVVSPSSVEE VFGTAAARSL VYTPLSTSSS GDYLINVKSI RVNGEKLAAK GPFSAELSTL VPYTTLESSL YAVFAEGYVK AATNAKSAAP VAPLGLCFTS
301: TSSAEVEFPA VELALQSEMV RWRIQGKNLL VDVGGGVQCL GIVNGGSNRV NPITMGGLQL EGFVLDFDLG NSMMGFGQRN SFRPEAL
101: DRALTRGDKN ADCDLLVRNG VVGITARGEL AADVLSLGSV SSQGTVDLLF ACAPPLLLRG LASGAQGVMG LGKAQISLPS QLAAETNERR RLTVYLSPSN
201: GVVSPSSVEE VFGTAAARSL VYTPLSTSSS GDYLINVKSI RVNGEKLAAK GPFSAELSTL VPYTTLESSL YAVFAEGYVK AATNAKSAAP VAPLGLCFTS
301: TSSAEVEFPA VELALQSEMV RWRIQGKNLL VDVGGGVQCL GIVNGGSNRV NPITMGGLQL EGFVLDFDLG NSMMGFGQRN SFRPEAL
001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
Arabidopsis Description
AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.