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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88901 Canola extracellular 95.87 95.87
CDY72428 Canola extracellular 29.2 84.96
CDX70865 Canola extracellular 85.27 84.4
CDX92553 Canola endoplasmic reticulum, vacuole 75.45 76.84
CDY13979 Canola endoplasmic reticulum, vacuole 74.94 75.72
AT5G19120.1 Thale cress endoplasmic reticulum, vacuole 75.19 75.39
VIT_05s0020g02720.t01 Wine grape extracellular, plasma membrane 36.18 38.25
KRH51036 Soybean plasma membrane, vacuole 37.21 34.78
PGSC0003DMT400083215 Potato extracellular 36.69 34.13
Solyc01g080020.2.1 Tomato extracellular, plasma membrane 36.43 33.81
KRH20901 Soybean vacuole 35.14 33.75
KRH11388 Soybean plasma membrane, vacuole 34.63 33.25
CDY37437 Canola mitochondrion, plastid 10.08 33.05
KRH02113 Soybean endoplasmic reticulum, vacuole 36.43 32.64
CDX86682 Canola endoplasmic reticulum, vacuole 33.33 31.08
CDY15456 Canola endoplasmic reticulum, vacuole 33.07 30.84
CDY32500 Canola endoplasmic reticulum, vacuole 33.33 29.72
CDY15455 Canola endoplasmic reticulum, vacuole 32.3 28.94
CDY13973 Canola cytosol 6.2 27.91
CDY37436 Canola endoplasmic reticulum, plasma membrane 21.19 27.7
CDY02589 Canola plastid 19.38 26.88
CDY02584 Canola cytosol 8.53 26.83
CDY13967 Canola cytosol 12.66 26.63
CDY13976 Canola cytosol 6.2 26.37
CDX92555 Canola extracellular 24.03 25.69
CDY47196 Canola extracellular 26.61 25.43
CDX83218 Canola extracellular, plastid 26.36 25.25
CDY30827 Canola extracellular, vacuole 25.32 24.69
CDY47197 Canola extracellular, plasma membrane 24.81 24.68
CDX92557 Canola extracellular 27.13 24.65
CDY13970 Canola extracellular, plasma membrane 23.77 24.27
CDY13974 Canola extracellular 18.09 24.22
CDY02588 Canola extracellular, plasma membrane 24.81 24.18
CDY47198 Canola cytosol, nucleus, plasma membrane 24.03 24.16
CDY36265 Canola mitochondrion 12.92 24.15
CDY13961 Canola extracellular 26.61 23.41
CDY70079 Canola extracellular, plasma membrane, vacuole 26.61 23.3
CDY13962 Canola extracellular, plasma membrane 23.26 21.63
CDX92556 Canola extracellular, plasma membrane 23.26 21.63
CDY13972 Canola cytosol 5.94 21.3
CDY13977 Canola plasma membrane 15.76 21.11
CDY19949 Canola plasma membrane 21.19 20.35
CDY00058 Canola extracellular, plasma membrane 21.19 20.35
CDY21504 Canola extracellular 25.06 16.96
CDY02583 Canola plasma membrane 9.56 10.85
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078J4U1UniProt:A0A078J4U1InterPro:Aspartic_peptidase_A1EnsemblPlants:CDY59021
ProteinID:CDY59021ProteinID:CDY59021.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00025456001InterPro:IPR021109
InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683
PANTHER:PTHR13683:SF553InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_N
TMHMM:TMhelixUniParc:UPI0004EF15DBSEG:seg:::
Description
BnaCnng34100DBnaCnng34100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4U1]
Coordinates
chrLK033718:+:29987..31150
Molecular Weight (calculated)
40535.6 Da
IEP (calculated)
5.479
GRAVY (calculated)
0.224
Length
387 amino acids
Sequence
(BLAST)
001: MASSSSCLNL FVFTFLSVFL ITKSQISYSV NGIVFPVTRD LLTGQYVSEI RLGDSSEPVK LVADLSGQLL WFDCSSEHLS SSRSLISGSS SGCLKAKAGN
101: DRALTRGDKN ADCDLLVRNG VVGITARGEL AADVLSLGSV SSQGTVDLLF ACAPPLLLRG LASGAQGVMG LGKAQISLPS QLAAETNERR RLTVYLSPSN
201: GVVSPSSVEE VFGTAAARSL VYTPLSTSSS GDYLINVKSI RVNGEKLAAK GPFSAELSTL VPYTTLESSL YAVFAEGYVK AATNAKSAAP VAPLGLCFTS
301: TSSAEVEFPA VELALQSEMV RWRIQGKNLL VDVGGGVQCL GIVNGGSNRV NPITMGGLQL EGFVLDFDLG NSMMGFGQRN SFRPEAL
Best Arabidopsis Sequence Match ( AT5G19120.1 )
(BLAST)
001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
Arabidopsis Description
AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.