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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0005g04570.t01 Wine grape endoplasmic reticulum, extracellular 37.16 56.7
AT1G03220.1 Thale cress endoplasmic reticulum, vacuole 78.72 53.81
CDY32500 Canola endoplasmic reticulum, vacuole 78.38 53.46
AT1G03230.1 Thale cress plasma membrane, vacuole 72.97 49.77
CDX86682 Canola endoplasmic reticulum, vacuole 68.24 48.67
CDY15456 Canola endoplasmic reticulum, vacuole 67.57 48.19
GSMUA_Achr8P09510_001 Banana endoplasmic reticulum, extracellular 40.2 44.07
CDY15455 Canola endoplasmic reticulum, vacuole 57.09 39.12
KRH71440 Soybean extracellular 56.42 38.39
VIT_07s0104g00180.t01 Wine grape endoplasmic reticulum, extracellular 54.39 36.93
KRH32004 Soybean endoplasmic reticulum 29.39 31.07
CDY72428 Canola extracellular 13.85 30.83
HORVU1Hr1G061380.1 Barley extracellular, golgi 43.58 30.0
TraesCS1D01G251700.1 Wheat extracellular, golgi 43.92 29.82
TraesCS1B01G263100.1 Wheat endoplasmic reticulum, extracellular 43.58 29.66
Zm00001d038151_P001 Maize extracellular 43.24 29.22
TraesCS1A01G251900.1 Wheat endoplasmic reticulum, extracellular 42.91 29.2
Os05t0402900-01 Rice extracellular 42.23 28.6
OQU77960 Sorghum endoplasmic reticulum, extracellular 42.57 28.0
Solyc01g080000.1.1 Tomato extracellular 41.22 27.42
PGSC0003DMT400023184 Potato extracellular, vacuole 40.54 27.03
Os05t0403000-01 Rice extracellular 39.86 27.0
Os05t0403300-01 Rice golgi 40.54 26.37
CDY13974 Canola extracellular 22.3 22.84
Os05t0403100-00 Rice extracellular 25.34 21.49
CDY59021 Canola endoplasmic reticulum, extracellular, plasma membrane 27.7 21.19
CDX88901 Canola extracellular 27.36 20.93
CDX70865 Canola extracellular 27.03 20.46
CDY13977 Canola plasma membrane 19.93 20.42
CDX92557 Canola extracellular 27.7 19.25
CDY13961 Canola extracellular 28.04 18.86
CDY36265 Canola mitochondrion 13.18 18.84
CDX92553 Canola endoplasmic reticulum, vacuole 23.99 18.68
CDY13979 Canola endoplasmic reticulum, vacuole 23.99 18.54
CDY70079 Canola extracellular, plasma membrane, vacuole 27.36 18.33
CDX83218 Canola extracellular, plastid 24.66 18.07
CDY47196 Canola extracellular 23.65 17.28
CDY30827 Canola extracellular, vacuole 21.62 16.12
CDY13970 Canola extracellular, plasma membrane 20.61 16.09
CDY13962 Canola extracellular, plasma membrane 21.96 15.62
CDX92556 Canola extracellular, plasma membrane 21.96 15.62
CDY02588 Canola extracellular, plasma membrane 20.95 15.62
CDY47197 Canola extracellular, plasma membrane 20.27 15.42
CDY19949 Canola plasma membrane 20.95 15.38
CDY00058 Canola extracellular, plasma membrane 20.61 15.14
CDY47198 Canola cytosol, nucleus, plasma membrane 18.58 14.29
CDX92555 Canola extracellular 16.89 13.81
CDY02583 Canola plasma membrane 15.88 13.78
CDY21504 Canola extracellular 25.0 12.94
CDY02589 Canola plastid 10.14 10.75
VIT_07s0005g04450.t01 Wine grape plastid 2.03 6.38
VIT_07s0005g04580.t01 Wine grape plastid 2.7 5.88
CDY37437 Canola mitochondrion, plastid 2.03 5.08
CDY13972 Canola cytosol 1.69 4.63
CDY13976 Canola cytosol 1.35 4.4
CDY02584 Canola cytosol 1.69 4.07
CDY13967 Canola cytosol 2.36 3.8
VIT_07s0005g04690.t01 Wine grape plastid 1.35 2.94
CDY13973 Canola cytosol 0.68 2.33
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078HI65UniProt:A0A078HI65InterPro:Aspartic_peptidase_A1EnsemblPlants:CDY37436
ProteinID:CDY37436ProteinID:CDY37436.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00064014001InterPro:IPR021109
PFAM:PF14543PANTHER:PTHR13683PANTHER:PTHR13683:SF532InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTM
InterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0004EE6945SEG:seg::
Description
BnaC08g45740DBnaC08g45740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HI65]
Coordinates
chrLK032400:+:89630..90520
Molecular Weight (calculated)
31584.4 Da
IEP (calculated)
8.983
GRAVY (calculated)
-0.010
Length
296 amino acids
Sequence
(BLAST)
001: MASSPTIIFS VLFLFIFSLS SAQPSFRPKA LLLPVTKDKS TNQYTTVINQ RTPLVAASVV FDLGGRNLWV DCDKDYVSST YRSPRCNSAV CSRAGSTSCG
101: ECYSPPRPGC SNNTCGSIPD NTVTGTATSG EFATDVVSIQ STNGFNPGRF VQIPDLIFGC GATFLLNGLA PGTVGMAGMG RHNIGLPSQF ASAFSFNRKF
201: AVCLNSGRGV AFFGNGPYVF LPGIQITRLQ TTPLLINPVS TASAYSQGDR SLQSISSASL TSKSTINQFR STERFSRSTP LPESEELNSA LWIRTP
Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)
001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.