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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038151_P001 Maize extracellular 88.22 90.64
Os05t0402900-01 Rice extracellular 78.0 80.32
HORVU1Hr1G061380.1 Barley extracellular, golgi 76.22 79.77
TraesCS1B01G263100.1 Wheat endoplasmic reticulum, extracellular 76.67 79.31
TraesCS1D01G251700.1 Wheat extracellular, golgi 76.67 79.13
TraesCS1A01G251900.1 Wheat endoplasmic reticulum, extracellular 75.56 78.16
Os05t0403100-00 Rice extracellular 57.33 73.93
Os05t0403000-01 Rice extracellular 71.78 73.91
Os05t0403300-01 Rice golgi 72.89 72.09
VIT_07s0005g04580.t01 Wine grape plastid 17.33 57.35
PGSC0003DMT400092749 Potato cytosol 23.11 56.83
GSMUA_Achr8P09510_001 Banana endoplasmic reticulum, extracellular 32.44 54.07
VIT_05s0020g02730.t01 Wine grape plasma membrane, vacuole 51.56 53.33
KRH71440 Soybean extracellular 49.78 51.49
CDY37437 Canola mitochondrion, plastid 13.33 50.85
CDY15456 Canola endoplasmic reticulum, vacuole 46.89 50.84
CDX86682 Canola endoplasmic reticulum, vacuole 46.89 50.84
VIT_07s0104g00180.t01 Wine grape endoplasmic reticulum, extracellular 49.11 50.69
Bra030526.1-P Field mustard plasma membrane, vacuole 46.44 50.48
AT1G03220.1 Thale cress endoplasmic reticulum, vacuole 47.78 49.65
Solyc01g079960.2.1 Tomato plasma membrane 48.44 49.43
Solyc01g079980.2.1 Tomato extracellular 48.0 49.43
PGSC0003DMT400023190 Potato extracellular, vacuole 48.0 49.09
AT1G03230.1 Thale cress plasma membrane, vacuole 46.44 48.16
Bra032555.1-P Field mustard endoplasmic reticulum, vacuole 46.22 48.15
PGSC0003DMT400094021 Potato plasma membrane, plastid, vacuole 47.56 47.77
CDY32500 Canola endoplasmic reticulum, vacuole 46.0 47.7
Solyc01g079990.1.1 Tomato plastid 31.78 47.35
KRH32004 Soybean endoplasmic reticulum 29.33 47.14
Solyc01g079970.2.1 Tomato extracellular, plasma membrane 46.0 46.62
KRG92423 Soybean nucleus 45.33 46.58
PGSC0003DMT400023187 Potato extracellular, plasma membrane 46.0 46.1
KRH34381 Soybean endoplasmic reticulum, plasma membrane 44.44 45.05
CDY15455 Canola endoplasmic reticulum, vacuole 42.44 44.21
VIT_07s0005g04450.t01 Wine grape plastid 9.11 43.62
Bra030525.1-P Field mustard extracellular, vacuole 42.89 43.08
VIT_07s0005g04570.t01 Wine grape endoplasmic reticulum, extracellular 18.44 42.78
PGSC0003DMT400095550 Potato mitochondrion 45.33 42.59
CDY37436 Canola endoplasmic reticulum, plasma membrane 28.0 42.57
EES04187 Sorghum extracellular 32.89 35.75
EES04185 Sorghum endoplasmic reticulum, plasma membrane 31.78 33.18
EES04186 Sorghum extracellular 30.67 33.09
VIT_07s0005g04690.t01 Wine grape plastid 9.11 30.15
EES04184 Sorghum extracellular, vacuole 29.33 29.46
EES10290 Sorghum extracellular 23.33 28.38
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:8085106UniProt:A0A1Z5R2J2InterPro:Aspartic_peptidase_A1GO:GO:0003674
GO:GO:0003824GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0019538InterPro:IPR021109InterPro:IPR033121EnsemblPlants:OQU77960ProteinID:OQU77960ProteinID:OQU77960.1
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PFscan:PS51257PFscan:PS51767PANTHER:PTHR13683
PANTHER:PTHR13683:SF268InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3009G131400SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_C
InterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0001A886EBRefSeq:XP_002439768.1InterPro:Xylanase_inhibitor_I-likeSEG:seg
Description
hypothetical protein
Coordinates
chr9:+:48497333..48498685
Molecular Weight (calculated)
46075.5 Da
IEP (calculated)
8.747
GRAVY (calculated)
0.307
Length
450 amino acids
Sequence
(BLAST)
001: MARHPASSAS PLALAAAALL FLCLLSACRA AAAGSKQPIT AVVLPVSKDD ATQQYVTGFR QRTPLVPVKA VLDLAGATLW VDCDGYASST YTRVPCGSTL
101: CRGLSRSPAC ATTCSGAPSP SCLNDTCGGF PENTVTRLST GGNVITDVLA LPTTFRPAPA PGPLATAPAF LFACGSTSLT RGLAAGAAGM ASLSRARFAL
201: PTQLASTFRF SRKFALCLPP AAAAGVVVFG DAPAYAFQPG VALSATDLTY TRLLVNPVST AGVSARGDKS DEYFVGVTGI KVNGRAVPLN ATLLAIDRKR
301: GGVGGTKLST VAPYTVLESS IYKAVTDAFA AETAMIPRAP APPVPPFKLC YDGSKVGSTR VGPAVPTIEL VLGDEATSWV VFGANSMVAT QGGALCLGVV
401: DGGKAPRTSV VIGGHMMEDN LLQFDLEASR LGFSSSLLFR QTNCNNFHLG
Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)
001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.