Factsheet for PGSC0003DMT400094021

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plasma membrane, plastid

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400092749	Potato	cytosol	39.51	96.72
Solyc01g079960.2.1	Tomato	plasma membrane	89.29	90.7
PGSC0003DMT400023190	Potato	extracellular, vacuole	85.04	86.59
PGSC0003DMT400095550	Potato	mitochondrion	81.47	76.2
PGSC0003DMT400023187	Potato	extracellular, plasma membrane	62.28	62.14
PGSC0003DMT400023183	Potato	extracellular	54.24	55.61
PGSC0003DMT400063081	Potato	extracellular, vacuole	53.35	54.69
PGSC0003DMT400063080	Potato	endoplasmic reticulum, extracellular	52.68	54.13
PGSC0003DMT400023184	Potato	extracellular, vacuole	50.45	50.9
HORVU1Hr1G061380.1	Barley	extracellular, golgi	48.44	50.47
Os05t0403100-00	Rice	extracellular	39.06	50.14
TraesCS1A01G251900.1	Wheat	endoplasmic reticulum, extracellular	48.21	49.66
Os05t0402900-01	Rice	extracellular	48.21	49.43
TraesCS1B01G263100.1	Wheat	endoplasmic reticulum, extracellular	47.99	49.43
TraesCS1D01G251700.1	Wheat	extracellular, golgi	47.54	48.85
Zm00001d038151_P001	Maize	extracellular	46.88	47.95
Os05t0403000-01	Rice	extracellular	46.65	47.83
OQU77960	Sorghum	endoplasmic reticulum, extracellular	47.77	47.56
Os05t0403300-01	Rice	golgi	47.54	46.81
PGSC0003DMT400023204	Potato	endoplasmic reticulum, vacuole	41.52	42.86
PGSC0003DMT400045193	Potato	endoplasmic reticulum, extracellular	40.62	42.72
PGSC0003DMT400038362	Potato	mitochondrion	32.59	42.44
PGSC0003DMT400023192	Potato	extracellular	40.18	42.06
PGSC0003DMT400023193	Potato	plasma membrane	39.29	40.93
PGSC0003DMT400073646	Potato	endoplasmic reticulum, vacuole	39.06	40.6
PGSC0003DMT400045232	Potato	plasma membrane, vacuole	39.51	40.14
PGSC0003DMT400083215	Potato	extracellular	36.83	39.66
PGSC0003DMT400003025	Potato	endoplasmic reticulum, plasma membrane	36.83	38.37
PGSC0003DMT400023203	Potato	plasma membrane, vacuole	33.71	38.13

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	ProteinID:ADU58605	ProteinID:ADU58605.1	InterPro:Aspartic_peptidase_A1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	EMBL:HQ342697	InterPro:IPR021109	InterPro:IPR033121	UniProt:M1DT78	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400043592	PGSC:PGSC0003DMG400043592	EnsemblPlants:PGSC0003DMT400094021	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF532	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0002957321	InterPro:Xylanase_inhibitor_I-like	SEG:seg	:	:

Description

Basic 7S globulin 2 small subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400043592]

Coordinates

chr1:-:61827695..61829041

Molecular Weight (calculated)

48306.4 Da

IEP (calculated)

9.109

GRAVY (calculated)

0.079

Length

448 amino acids

Sequence
(BLAST)

001: MNSLRLIMIS KINSLSLFLS LLLLFSLSSA KTPPRPRAFL LPVTKDVVTK QLITTISQRT PLVPVKLTID LGQRFLWLDC GNGYVSSSYK PVPCGSIPCK
101: RSLSHDCAET CLDPQASPGC NHNTCSHIPY NPFSRTSTGG ELAQDVLSLQ STDGLNPRKY LSANGVVFDC APKPLLEGLA KSVEGILGLG NGYVGFPTQL
201: ANAFRVPRKF AICLTSSTTS RGVIFFGDSP YVFLSGMDVS KRLVYTPLLK NPVSTSGSYF EGEPSTDYFI GVTSIKINGN VVPINTTLLN ITKDGKGGTK
301: ISTVDPYTKL ETSIYNALTK AFVKSLSKVP RVKPVAPFEV CYNRTSLGST RVGPGVPPIE LVLGNKNATT SWTIWGVNSM VAVNNDVLCL GFVDGGVEFE
401: PTTSIVIGAH QIEDNLLQFD IANKRLGFTS SLLFGQTTCA NFNFTSKP

Best Arabidopsis Sequence Match ( AT5G19110.1 )
(BLAST)

001: MGSSLTRLLV FLSIFAAIAL KSNSQYLLPI TKHEPTNLFY TTFNVGSAAK SPVNLLLDLG TNLTWLDCRK LKSLSSLRLV TCQSSTCKSI PGNGCAGKSC
101: LYKQPNPLGQ NPVVTGRVVQ DRASLYTTDG GKFLSQVSVR HFTFSCAGEK ALQGLPPPVD GVLALSPGSS SFTKQVTSAF NVIPKFSLCL PSSGTGHFYI
201: AGIHYFIPPF NSSDNPIPRT LTPIKGTDSG DYLITVKSIY VGGTALKLNP DLLTGGAKLS TVVHYTVLQT DIYNALAQSF TLKAKAMGIA KVPSVAPFKH
301: CFDSRTAGKN LTAGPNVPVI EIGLPGRIGE VKWGFYGANT VVKVKETVMC LAFIDGGKTP KDLMVIGTHQ LQDHMLEFDF SGTVLAFSES LLLHNTSCST
401: WPSQK

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:TAIR;Acc:AT5G19110]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.