Factsheet for PGSC0003DMT400023184

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080000.1.1	Tomato	extracellular	92.57	92.36
PGSC0003DMT400092749	Potato	cytosol	21.4	51.91
PGSC0003DMT400023190	Potato	extracellular, vacuole	51.13	51.59
PGSC0003DMT400094021	Potato	plasma membrane, plastid, vacuole	50.9	50.45
KRH71440	Soybean	extracellular	46.4	47.36
PGSC0003DMT400023183	Potato	extracellular	45.72	46.45
PGSC0003DMT400095550	Potato	mitochondrion	49.77	46.14
GSMUA_Achr8P09510_001	Banana	endoplasmic reticulum, extracellular	27.93	45.93
CDX86682	Canola	endoplasmic reticulum, vacuole	42.79	45.78
Bra030526.1-P	Field mustard	plasma membrane, vacuole	42.57	45.65
CDY15456	Canola	endoplasmic reticulum, vacuole	42.34	45.3
AT1G03220.1	Thale cress	endoplasmic reticulum, vacuole	44.14	45.27
VIT_07s0005g04570.t01	Wine grape	endoplasmic reticulum, extracellular	19.59	44.85
PGSC0003DMT400023187	Potato	extracellular, plasma membrane	44.82	44.32
VIT_07s0005g04580.t01	Wine grape	plastid	13.51	44.12
CDY32500	Canola	endoplasmic reticulum, vacuole	43.02	44.01
Bra032555.1-P	Field mustard	endoplasmic reticulum, vacuole	42.79	43.98
KRH32004	Soybean	endoplasmic reticulum	27.25	43.21
AT1G03230.1	Thale cress	plasma membrane, vacuole	42.12	43.09
PGSC0003DMT400063080	Potato	endoplasmic reticulum, extracellular	40.99	41.74
VIT_07s0005g04450.t01	Wine grape	plastid	8.78	41.49
PGSC0003DMT400063081	Potato	extracellular, vacuole	40.54	41.19
CDY37436	Canola	endoplasmic reticulum, plasma membrane	27.03	40.54
CDY15455	Canola	endoplasmic reticulum, vacuole	37.61	38.66
Bra030525.1-P	Field mustard	extracellular, vacuole	38.51	38.17
PGSC0003DMT400083215	Potato	extracellular	34.68	37.02
PGSC0003DMT400045193	Potato	endoplasmic reticulum, extracellular	35.36	36.85
CDY37437	Canola	mitochondrion, plastid	9.68	36.44
PGSC0003DMT400023193	Potato	plasma membrane	35.14	36.28
PGSC0003DMT400023204	Potato	endoplasmic reticulum, vacuole	35.36	36.18
PGSC0003DMT400023192	Potato	extracellular	34.68	35.98
PGSC0003DMT400073646	Potato	endoplasmic reticulum, vacuole	34.46	35.5
PGSC0003DMT400045232	Potato	plasma membrane, vacuole	34.68	34.92
PGSC0003DMT400023203	Potato	plasma membrane, vacuole	30.41	34.09
PGSC0003DMT400003025	Potato	endoplasmic reticulum, plasma membrane	31.76	32.79
PGSC0003DMT400038362	Potato	mitochondrion	24.55	31.69
VIT_07s0005g04690.t01	Wine grape	plastid	8.56	27.94

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
InterPro:IPR033121	UniProt:M1AHX9	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400008979
PGSC:PGSC0003DMG400008979	EnsemblPlants:PGSC0003DMT400023184	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF532	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI00029651FC	SEG:seg

Description

Basic 7S globulin 2 small subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400008979]

Coordinates

chr1:+:61781826..61783160

Molecular Weight (calculated)

48461.6 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.016

Length

444 amino acids

Sequence
(BLAST)

001: MKIPHLLLCF LLFICSSNYS IAKKPHKHHP LLFLPVFKDE ITKQYVTQIY QRTPLVPVNL TVDLGGRFLW MDCENDYISS SYKNVPCGSR PCKLSGSQGC
101: YGSSCPVPPM PGCNNYTCSH IPYNPIKRSS TDGELAQDVI ALWSINNNNN NNNNGSKILS SSTSGVMFNC PGDFLLEKLA YGVKGMAGLG NGYTGLPSQL
201: ATAFHLPRKF AICLSGNTKS NGVILFGERR SYHASNEVLT YTPLLKNPVS TAGAYFPGEP SVEYFIGIEK ILVNGKIVPI DNKLLAINMT NGVGGTKIST
301: VVPYGTMESS IYKAFKDAFL KAIAKVPIAK PISPFELCFN LSNSATLTGL VIPQVSLVLQ GEHNNSTTWD LSMNNFMASP TINDSSDLLC LGFLDGGENA
401: ETSIVLGGMQ IEENLLEFDL VKKRMGFKSV YMSPDLVSCS NKFR

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.